Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq2 132 6e-26 >seq2 Length=3722621 Score = 132 bits (146), Expect = 6e-26 Identities = 369/562 (66%), Gaps = 8/562 (1%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 ||| || || || ||| ||| | ||||||||| | || | ||||| || || || Sbjct 2460737 CAAGCACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGT 2460796 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||| |||||||| | ||| ||||| || ||||| || || ||||| || || ||||| || Sbjct 2460797 GAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAA 2460856 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTC 32833 ||| || || || || || || ||||| | ||| | || | || ||| | ||| Sbjct 2460857 GAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAAAGCGGAATTCTTGTC 2460916 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 | ||||| | ||||| ||||||||||| || | ||||| || ||||| || || Sbjct 2460917 AGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGC 2460976 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953 | |||||| || | | | || || | || ||||| || | || || Sbjct 2460977 GTCAAAGAGGTACTCACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 2461036 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 | || ||||| ||||| || || ||||| || |||||||| || | ||||||| Sbjct 2461037 GGTCTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCCTCGGC 2461096 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 ||| || || | | || || || | | || || || || || ||||| ||| Sbjct 2461097 GGCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGC 2461156 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AG---TTTAT 33129 || || || || | ||||| | |||| || || | |||| || || | Sbjct 2461157 GGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATC-GTTGTTGAGCCTGTTGT 2461215 Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189 |||| |||| || ||| || || | ||||| || || | ||||| || || ||||||| Sbjct 2461216 TCCAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAAGAAGCCTCTG 2461275 Query 33190 CCTTTTTATACATATTCCAGAT 33211 |||| || ||||| | |||||| Sbjct 2461276 CCTTCTTGTACATTTGCCAGAT 2461297 Score = 109 bits (120), Expect = 7e-19 Identities = 288/439 (66%), Gaps = 3/439 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| | ||| ||||| ||| ||| | ||||| || | || | ||||| || Sbjct 2463238 AACAGGAGACAAGCGAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTCGAG 2463179 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 ||||| | |||||||| || |||||||| || ||||| || || || ||||| | || Sbjct 2463178 AACGTCAAGCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCAAAACACCCG 2463119 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || ||||| || || ||||| || || ||||| | || | ||| | | ||| | Sbjct 2463118 GAGAAGAATATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCGAACACGGACTGG 2463059 Query 32832 TCATG---TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 |||| |||||| | ||||||||||||||||| || | || || || ||||| Sbjct 2463058 TCATCAGCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGATGCAGGGTATAGTCTCG 2462999 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || | ||||| | | | || | || | | || || ||||| | ||| Sbjct 2462998 ATGGCGTCGAAGAGGAACGTCCTCTCGTCTGGGTCCCTGATGTAAGTGTCAATGAGAAGG 2462939 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || | || || || | |||||| || || || || || |||||||||| ||| Sbjct 2462938 GAGTAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGAAGCATCGCGCC 2462879 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 |||| ||| || || || |||| || || | | || || || || || ||||| Sbjct 2462878 TCGGCGGCCTGAACCTCGTTAGAAAACCGCTCGACGAGGTTCTCGTTGACGATACCGTCC 2462819 Query 33069 CTGGCTGCAAAAAACGCCA 33087 ||| |||||||| |||| Sbjct 2462818 GAGGCCGCAAAAAAGGCCA 2462800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630764417600