Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq3 98.7 8e-16 >seq1 Length=4606855 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | ||| || | || | || || || ||||| ||||||||||| Sbjct 1904268 ATACCTCCCCGCAGACGCAAGACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCC 1904209 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| ||| || || || || |||||| |||| ||||| || ||||| || Sbjct 1904208 GAGAGAGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGT 1904149 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| |||||| || | | || | ||| || | || ||| Sbjct 1904148 GGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCG 1904089 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| ||||| || || || || || ||||||||||| Sbjct 1904088 ACCTCCAGCGTGATCGTCTTGCCAGTAAGCGTCTTCACGAAAATCTGCAT 1904039 >seq3 Length=3223173 Score = 98.7 bits (108), Expect = 8e-16 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || ||||||||||| ||| | |||||| || || || || || || Sbjct 2802276 CGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGCTGCTTCCC 2802335 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| |||||||| ||||| || || ||||| || || || ||||| || Sbjct 2802336 GGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATCTTCGCCTT 2802395 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||||| ||| ||||| || | ||| | || |||||||||| || Sbjct 2802396 CACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAAGGT 2802455 Query 114365 TTTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 2802456 CTTCACGAAGATCTGCATGCCT 2802477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133601219472