Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 136 5e-27 seq2 116 4e-21 >seq4 Length=2972551 Score = 136 bits (150), Expect = 5e-27 Identities = 247/357 (69%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 114576 ACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 114635 |||| |||| ||||||||| || |||||| | || || ||||| |||||| || Sbjct 1423371 ACTTACTGTTGGCCGCATCCTTATAGAGCATGAAAGGACCACCAGTCTCGATTTGGGCCT 1423430 Query 114636 TGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGG--CGTTGGCTCGCCCCTCCT 114692 || || || | ||| | | || | | || | | ||| ||| || || ||||| Sbjct 1423431 CCAGGATGGCGTACCAAAGCTTCTGAGCCTCG-ATAGTCTTCCGT--GCGCGACCCTCGC 1423487 Query 114693 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 114752 |||||||| |||||| || |||||||| |||||| | | || ||| || |||| Sbjct 1423488 GCTCGTACTGCTCGTAGAGTGCCTCAAACTCATCACCCCAGACTTCGTGGAGACCAGGTG 1423547 Query 114753 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGT 114812 | | | |||||||||||||||||||| ||||| ||| || ||||||||||| || | Sbjct 1423548 CTTCGTTTGGGCAGAAGAGAGACCATTTGCCACCAGACTCGACGCGCTTCATGAACAGAT 1423607 Query 114813 CTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 114872 | |||||||| || || ||||||| || || ||| | || || | || || || Sbjct 1423608 CGGGGATCCAAAGCGCGTAGAAGAGGTCACGGGCTCGAACCTCCTCCTTGCCGTGGTTCT 1423667 Query 114873 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGA 114929 |||| || | || || | ||| || |||||||| ||||| ||||| | |||| Sbjct 1423668 TGCGCAGGTCGATGAACTCGAAGATGTCGGCGTGCCAGGGTTCGAGGTAGATGGCGA 1423724 >seq2 Length=3722621 Score = 116 bits (128), Expect = 4e-21 Identities = 345/524 (66%), Gaps = 15/524 (3%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||||||||| || |||||||| || |||||||| || || Sbjct 2460744 GCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGTGAGACCG 2460803 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | || |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 2460804 GGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAAGAAGATA 2460863 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA--- 126223 ||||| ||| ||||| || | || || || || || |||| || || ||||| Sbjct 2460864 CCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAA--AGCG-GAATTCTTGTCAGAG 2460920 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| | ||||| | ||||| |||| ||| || |||| |||| ||| || ||| Sbjct 2460921 ATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGCGTCA 2460980 Query 126284 AAGAGTTCCT--TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 ||||| | || | ||| || || |||||||| |||| ||||| || || | Sbjct 2460981 AAGAGGTACTCACGCTGCCTG--GGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTAGG 2461038 Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 | ||| |||| | | ||| || | || | |||||||| |||| || ||| Sbjct 2461039 TCTCGGAATGGATGTTCTCCATCAT-GATTTGGAAGCCGTAGAAACAGCGGGCCTCGGCG 2461097 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 ||| ||||| | || ||| | | ||||| || || || || || | Sbjct 2461098 GCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGCG 2461157 Query 126461 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTC 126517 || || || || |||| || | ||| | | |||| | ||| || | | ||| Sbjct 2461158 GCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATCGTTGTTGAGCCTGTTGTTC 2461217 Query 126518 CAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||| | |||||||| || ||||| | |||||| |||||||| Sbjct 2461218 CAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCA 2461261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352435160480