Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 102 8e-17 seq1 102 8e-17 >seq3 Length=3223173 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || || | ||| || || || ||||||||||| || | | || || |||| || ||| Sbjct 2802268 AGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGC 2802327 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 ||||| ||||| | || || |||||||||||||| || || || || || ||||| || Sbjct 2802328 TGCTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATC 2802387 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| || || | || || || || ||||| | || | |||||||||| Sbjct 2802388 TTCGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCG 2802447 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || || ||||| || ||||| Sbjct 2802448 GTCAAGGTCTTCACGAAGATCTGCAT 2802473 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||||||||| || | | |||||| |||| || | ||||||||| ||| | Sbjct 2802002 TCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCAACTGCTTGCCCGCAAAG 2802061 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | ||||||||||| ||||| || || || || || || || || ||| ||| Sbjct 2802062 ATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTGACATTG 2802121 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | ||||| || | ||| | |||||||| |||| || |||||| Sbjct 2802122 TCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCCGTCAGCGTCTTTACG 2802181 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 2802182 AAGATTTGCAT 2802192 Score = 96.9 bits (106), Expect = 3e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || |||| ||||| || || || ||||||||||| | | |||||| |||| || ||| Sbjct 2802547 AGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGCCCGTCCTCGAGC 2802606 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 |||||||||||| | ||||| ||||||||||||||||| || Sbjct 2802607 TGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGAGGGAT 2802647 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | || |||||| | || || |||||||||||||| | Sbjct 2801719 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAG 2801778 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| ||||||||||| || ||||| || || || || || || || ||| || Sbjct 2801779 ATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 2801838 Query 64373 TCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | || | ||| || || || || | || | |||||| || || | || || | Sbjct 2801839 TCGATCGTGT--CCGACGACTCAACCTCCAAGGTGATGGTCTTCCCCGTGAGCGTCTTGA 2801896 Query 64431 CGAAAATTTGCAT 64443 |||| || ||||| Sbjct 2801897 CGAAGATCTGCAT 2801909 >seq1 Length=4606855 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || ||||| ||||| | | ||||| | || ||||||||||| || ||| || Sbjct 1903951 TCCTTCTGGATGTTATAATCGGACAACGTGCGACCATCCTCAAGCTGCTTCCCAGCAAAA 1903892 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 ||||| |||||||| || ||||| || ||||| || ||||| || ||| ||| || Sbjct 1903891 ATGAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTG 1903832 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | || || || | ||| | ||||| || ||||| || || ||| Sbjct 1903831 TCGATCGTGTCCGAAGACTCGACCTCGAGAGTGATAGTCTTTCCTGTCAACGTCTTCACG 1903772 Query 64433 AAAATTTGCAT 64443 ||||||||||| Sbjct 1903771 AAAATTTGCAT 1903761 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | ||| || | ||||| ||| || || || || || ||||| || | Sbjct 1903760 ACCACCGCGGAGACGAAGGACCAAATGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGA 1903701 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || |||| ||||||||||||||||| | || || || |||||||| || || Sbjct 1903700 AAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGG 1903641 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || ||||| || || || || ||| ||| || | || || | || || Sbjct 1903640 GATGCCCTCTTTGTCCTGAATCTTCGCCTTAACATTATCGATGGTGTCGGACGACTCGAC 1903581 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | |||||||| || | || || || || |||||||| Sbjct 1903580 CTCAAGAGTGATAGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCAT 1903533 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| ||||| || ||||| ||||||||||| | || || || | || || Sbjct 1904247 ACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCCGAGAGAGTACGACCATCCTCG 1904188 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 ||||||||||| || | || || || |||||||| || || || || || || || || Sbjct 1904187 AGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGA 1904128 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || ||| || || | |||||| | || || || | || | |||||| Sbjct 1904127 ATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCGACCTCCAGCGTGATCGTCTTG 1904068 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || | || || |||||||| |||||| Sbjct 1904067 CCAGTAAGCGTCTTCACGAAAATCTGCATT 1904038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643825692640