Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 141 9e-29 >seq4 Length=2972551 Score = 141 bits (156), Expect = 9e-29 Identities = 581/900 (65%), Gaps = 42/900 (5%) Strand=Plus/Minus Query 94531 AAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTC 94590 ||||| ||||||||| | ||||| |||||| || || || || || |||||| || Sbjct 1423324 AAGTCAAACCAGCAGAATCTCGGCACCATCAAGTCGTCCAACCTATGTACGGAGATTATC 1423265 Query 94591 GAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACT 94650 || ||| | || || || |||| ||| || || || || | |||||| | | || | Sbjct 1423264 GAATATTCCTCCCCCGATGAGACTGCCGTCTGCAATCTTGCATCCATCGCCATTCCCTCC 1423205 Query 94651 TTCGTGCGAG-ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTT 94709 ||| | |||| ||| | | ||| |||| || |||| | || Sbjct 1423204 TTCAT-CGAGGATGGCAAG-----TACAACTTCA----------AGAAGCT---GCACGC 1423164 Query 94710 CGCGGG-AAGGATG--GTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGT 94766 || | |||| || | ||| ||||| ||| | | |||||| |||| |||||| | Sbjct 1423163 CGTTGCCAAGGTTGTCGCCTTCAACCTCAACCGCATTATCGACGCCAACTACTACCCGAT 1423104 Query 94767 CCCGGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTT 94826 || ||||| ||| ||| || ||||| ||||||||||| || || |||||| | Sbjct 1423103 TCCCGAGGCCCGCCGCTCGAACATGCGCCATCGTCCCATCGGCATTGGTGTGCAGGGTCT 1423044 Query 94827 CGCGGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAA 94886 ||| ||||| | || | | ||| |||| | |||||| |||| ||| | || Sbjct 1423043 CGCAGACGCCTTCATGGCGCTCCGTATGCCGTTTGACTCTATCGAGGCGCGAAAGCTCAA 1422984 Query 94887 TTTGAACATATTCGAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGC-C 94944 | || | || | ||| | || || ||| ||| | || ||| || | |||| | Sbjct 1422983 TCTGCAGATCTCCGAGACAATCTACCACGCCGCCGTCGAGGCAAGTTGTG-AGATGGCAC 1422925 Query 94945 AGATCGGACGGCGGGCCACACGAATCGTTCCGCGGATCG-CCCTTGGAACAGGGCATTTT 95003 ||| | || || || |||| | | | | || | | ||| | |||||| | Sbjct 1422924 AGA-CTGATGGT---CCCTACGAGACATAC-GAGGGTAGTCCCGCGTCCCAGGGCCAGCT 1422870 Query 95004 TCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGC 95063 || | |||||| ||||| || | || ||| ||| | ||||||| ||| || Sbjct 1422869 CCAATACGACCTATGGGGCGTCACTCCTACGGATCTTTGGGACTGGGCCAGTCTCAAGGC 1422810 Query 95064 TGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTC 95123 | || | ||||| | | ||| |||| || || || |||||||| || ||||| Sbjct 1422809 CAAGGTCGCTCAGCACGGCCTTAGGAACTCGCTCCTCGTCGCGCCCATGCCTACCGCCTC 1422750 Query 95124 CACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAA 95183 ||| ||||||| || ||||||||||||| ||||| || | |||| |||| | || | Sbjct 1422749 CACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCAGCAACATCTATAC 1422690 Query 95184 CAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGAC 95243 | | || |||||||| || || |||| ||| | | | ||||| || || || | Sbjct 1422689 CCGTCGCGTGCTCGCTGGCGAGTTCCAGGTCGTGTGCCCGTGGCTCCTCCGCGAGCT--C 1422632 Query 95244 GTC--TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC---CAACGGC 95298 ||| || || ||||| || | | || ||| | || | ||| |||||| Sbjct 1422631 GTCGAGCTCGGCCTGTGG---AACGATGACATGAAGAATATGATTATCGCCAACAACGGG 1422575 Query 95299 TCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGG 95358 ||| ||||||||||| || || || ||| |||||||| ||||||||||||| ||| Sbjct 1422574 TCCATCCAGAACATCGACATTATCCCCGACGACGTCAAGGCGATCTACAAGACCGTCTGG 1422515 Query 95359 GAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 ||||| | ||| | | || |||| ||| || | ||| || | |||||||||||| Sbjct 1422514 GAGATTTCACAGAAGAAGGTTCTTGACCTCGCCGCGGACCGTGGCGCATTCATCTGCCAG 1422455 Score = 134 bits (148), Expect = 1e-26 Identities = 182/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 |||| ||||| || ||||| || ||||||||| | || ||||||||||| |||| Sbjct 1423838 GTTCTTACATTGCGGGCACCAACGGTTACTCCAACGGAATTGTTCCTATGCTCCGTGTCT 1423779 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 | || | ||||| || || || || ||||| | | | || | ||||| Sbjct 1423778 ACGACGCTACCGCGCGGTATGTCGATCAAGGTGGCAACAAGCGCCCTGGCGCGTTCGCCA 1423719 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| ||||| ||||||||||| ||| | | |||||||||||||| |||||||||| Sbjct 1423718 TCTACCTCGAACCCTGGCACGCCGACATCTTCGAGTTCATCGACCTGCGCAAGAACCACG 1423659 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | ||| | |||||||||||||| || ||| | || || || || | Sbjct 1423658 GCAAGGAGGAGGTTCGAGCCCGTGACCTCTTCTACGCGCTTTGGATCCCCGATCTGTTCA 1423599 Query 94307 TGAAACGCGTCGAG 94320 |||| ||||||||| Sbjct 1423598 TGAAGCGCGTCGAG 1423585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722235289760