Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq4 125 1e-23 seq2 122 1e-22 >seq4 Length=2972551 Score = 125 bits (138), Expect = 1e-23 Identities = 325/485 (67%), Gaps = 18/485 (4%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || |||||||||| || || | |||| || | | | |||||||||||||| ||| Sbjct 1422309 TCGACCGTGAACTTGATCGCCTGTGCGGCCGGGCGTGTGCGGAGATAGTACATGCCCGTC 1422368 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||||| ||| ||||| | ||||||| | || | | |||| | ||| Sbjct 1422369 TTCAGACCCTTCTTCCAGCCGTAAAAGTGCATGCTCGTCAACTGCC---CGTTCG--TCG 1422423 Query 203963 GC-----CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 || || ||| | ||| || ||||| ||| |||||| | |||| || || ||| Sbjct 1422424 GCGCTTGCAGGTGGACGTTGAGCGACTGCGACTGGCAGATGAATG-CGCCACGGTCCGCG 1422482 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 || | | | || ||||||| ||||||||||| || |||||| | | || || || Sbjct 1422483 GCGAGGTCAAGAACCTTCTTCTGTGAAATCTCCCAGACGGTCTTGTAGATCGCCT-TGAC 1422541 Query 204076 GT-GTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 || || | || || | | | || ||| || || ||||||| ||| || | | || Sbjct 1422542 GTCGTCGGGGATAATGT--CGATGTTCTGGATGGACCCGTTGTTGGCGATAATCATATTC 1422599 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || || ||||| ||| | | || ||||| || | || ||| | | Sbjct 1422600 TTCATGTCATCGTTCCACAGGCCGAGCTCGACGAGCTCGCGGAGGAGCCACGGGCACACG 1422659 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | ||||| | ||||| | | |||| ||||| |||| ||||| Sbjct 1422660 ACCTGGAACTCGCCAGCGAGCACGCGACGGGTATAGATGTTGCTGGTGTATGGCTCGAAG 1422719 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | |||||| | ||| ||| || |||||||| || | ||| || Sbjct 1422720 CACTCGTTGTTGCCCAGAATCTGCGATGTGGAGGCGGTAGGCATGGGCGCGACGAGGAGC 1422779 Query 204314 GAGTT 204318 ||||| Sbjct 1422780 GAGTT 1422784 >seq2 Length=3722621 Score = 122 bits (134), Expect = 1e-22 Identities = 321/490 (66%), Gaps = 0/490 (0%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 || || | ||||||||||||| ||||| |||||||| || ||||||| |||||| || Sbjct 2460732 AAGAGCAAGCACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAG 2460791 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | |||| || ||||| | || ||| |||||||| || || | ||| || | ||| Sbjct 2460792 AAAGTGAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCA 2460851 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || ||||| ||||| || || || || || || || | || | |||| || || Sbjct 2460852 GAGAAGAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAAAGCGGAATTC 2460911 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 ||||| | |||| | |||||| || |||||||| |||||| || || |||| Sbjct 2460912 TTGTCAGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCG 2460971 Query 160154 ACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTC 160213 | ||||| ||| | || ||| | | |||||||| ||| | || || Sbjct 2460972 ATGGCGTCAAAGAGGTACTCACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGG 2461031 Query 160214 GAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCC 160273 ||||| | || | || | || || || || || ||| ||||||| | ||| Sbjct 2461032 GAGTAGGTCTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCC 2461091 Query 160274 TCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCG 160333 || ||| ||||| | | ||| | | | || || | || || | ||||| Sbjct 2461092 TCGGCGGCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCC 2461151 Query 160334 GCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTC 160393 | ||| || ||||| || | || || |||| |||||| | ||| || |||||||| || Sbjct 2461152 GAGGCGGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATCGTTGTTGAGCCTG 2461211 Query 160394 TTTTCCCAGT 160403 || | ||||| Sbjct 2461212 TTGTTCCAGT 2461221 Score = 87.8 bits (96), Expect = 3e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 |||| ||| | ||||||| ||||||||| ||||| |||||||||| | || || Sbjct 2460392 CTTCGAGTAATCCGACACACGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATCAT 2460451 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| ||||| ||||| ||| |||| | ||||| || | || Sbjct 2460452 ATCCATGAAGTCGAAGGGGTTTGTCACGCCGTAGGACTTCTCGCAACCGAGCGCGACAAG 2460511 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807 || | ||| ||||| || |||||||| ||||| ||| |||| || || | || Sbjct 2460512 CAGGCGGTCGGCCACGAACTCGATGTATTGGCACATGAGCTTTGAGTTCATGCCAATGAG 2460571 Query 159808 CCTAACGGGGAGCGCTTC 159825 |||||||||||| || Sbjct 2460572 TGCAACGGGGAGCGCATC 2460589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153649447360