Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1 102 3e-16 seq10 84.2 9e-11 >seq1 Length=4606855 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || |||| || || ||||| ||||| || || || || || Sbjct 1903761 ATGCAAATTTTCGTGAAGACGTTGACAGGAAAGACTATCACTCTCGAGGTCGAGTCTTCG 1903820 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || |||| ||| || ||||| |||||||| || ||||||||||| Sbjct 1903821 GACACGATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAAGGGATCCCTCCTGATCAG 1903880 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | ||||| | ||||| || ||||| ||||| | || ||| | |||||||| Sbjct 1903881 CAGCGCCTCATTTTTGCTGGGAAGCAGCTTGAGGATGGTCGCACGTTGTCCGATTATAAC 1903940 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 1903941 ATCCAGAAGGA 1903951 >seq10 Length=2285585 Score = 84.2 bits (92), Expect = 9e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 |||| || ||||| || ||||| || || |||||||||||||| || || ||||| | Sbjct 1791317 TTACCGTCCCCGCGTACTTCAACGACGCGCAACGGCAAGCAACCAAGGACGCAGGCACTG 1791258 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 | |||||| | | |||||||| | || || || || || || ||||| || ||||| | Sbjct 1791257 TCGCTGGTCTTGACGTTCTTCGTGTCATCAACGAGCCCACGGCGGCTGCACTCGCATACG 1791198 Query 451449 GACT 451452 |||| Sbjct 1791197 GACT 1791194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975714451032848