Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7 378 9e-100 seq4 95.1 2e-14 seq9 86.0 8e-12 >seq7 Length=2576904 Score = 378 bits (418), Expect = 9e-100 Identities = 566/801 (71%), Gaps = 2/801 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| ||||| ||||| |||||||| Sbjct 1176644 TCACCGGTAAGGATGGCGGCCTGGACAGCAGCACCGTAGGCGACAGCCTCGTCGGGGTTG 1176703 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACAT-TTGTTGAATTTTCGG 7128 |||| || || | || || || || || | ||||| | | ||| || | || Sbjct 1176704 ATCGACTTGTTGGGCTCCTTGCCATTGAAGAAGTCCGAGACGAGCTTGACGA-TACGGGG 1176762 Query 7129 GATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGA 7188 ||| || || || || || || | ||||| || | || | || || |||||||| | Sbjct 1176763 GATACGAGTAGAGCCGCCAACGAGGACGATCTCGTGGACCTGCGCCTTGTCGATCTTCGC 1176822 Query 7189 GTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTC 7248 || ||||| || || ||||| || | | |||||| | ||| || ||||| Sbjct 1176823 ATCGCGAAGGACCTTCTCAACAGGCTCGAGAGTGGAACGGAAGAGGTCTTGGCAGAGTTC 1176882 Query 7249 CTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAAT 7308 ||| ||||| |||||||| | ||| || |||||||||| |||||| | | ||| || || Sbjct 1176883 CTCGAAACGGGCACGGGTGAGGGACGTGTAGAAATCAATACCGTCGAAGAGCGAGTCGAT 1176942 Query 7309 TTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCG 7368 || || || || || || | || || | || ||||| |||||||| || || || || Sbjct 1176943 CTCGATCGTGGTCTGGGCGGCAGAGGAGAGGGTGCGCTTAGCGCGCTCGCAGGCGGTACG 1177002 Query 7369 TAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC 7428 | |||||| || || || ||||| ||||||| || |||||||| || || |||||||| Sbjct 1177003 GAGACGACGGAGAGCGCGGGGGTTGCCGGAAAGGTCCTTCTTATGCTTGCGCTTAAACTC 1177062 Query 7429 TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 | ||||||||| | ||| | |||||| || |||||||||||||| || || || Sbjct 1177063 CTGAGAGAAGTGGGTGACGAGACGGTTATCGAAGTCCTCACCACCCAAGTGGGTGTCACC 1177122 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| || || ||||| | || ||| | | | ||| |||||||| || Sbjct 1177123 GGCGGTGGCCTTGACCTCGAAAATACCCTCCTCGATGGTCAGGAGCGAGACATCAAAGGT 1177182 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACC 7608 || || || || || || ||||| ||||| ||| || | |||||||||||||| Sbjct 1177183 TCCTCCGCCAAGATCGAAGATGAGGACGTTTCGCTCGCCGGTCGTCTTCTTATCGAGACC 1177242 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 ||| ||||| || || || || || || || || ||||| || ||| || || | || Sbjct 1177243 GTAGGCGATGGCAGCAGCGGTAGGCTCGTTGATGATACGGAGGACGTTGAGACCGGAGAT 1177302 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 || | || || || ||||| || || || || |||||||||||||| ||||| || || Sbjct 1177303 GGTACCGGCGTCCTTGGTCGCCTGACGCTGAGAGTCGTTAAAGTAGGCGGGGACGGTCAC 1177362 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAG 7788 ||| || ||||| | ||||| || || || |||| || ||||| ||||| || Sbjct 1177363 GACGGCAGAGGTGACGGTGCCGCCGAGGTAAGACTCAGCGACCTCCTTCATCTTGGTGAG 1177422 Query 7789 AACCATCGATGAAATCTCTTC 7809 |||||||| || ||||| || Sbjct 1177423 GACCATCGAGGAGATCTCCTC 1177443 Score = 136 bits (150), Expect = 5e-27 Identities = 147/194 (76%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 7922 TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATG 7981 |||| ||||| | ||||| |||||||| || || || || ||||| | ||||||||| Sbjct 1177611 TCCGTGAACTTGCGACCGATGAGACGCTTAGCGTCGAAGACGGTGTTGTGGGGGTTCATC 1177670 Query 7982 GCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACG 8041 || ||||||||| || ||||| ||||| ||||| || ||| | || || ||||| Sbjct 1177671 GCGACTTGGTTCTTGGCGGCGTCACCGATGAGACGCTCGGTAT---CGGTGAAGGCGACA 1177727 Query 8042 TACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGC 8101 || || ||||| || || || || |||||||| || || || || || || ||||||||| Sbjct 1177728 TAGGAGGGGGTAGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCGACACGATCGTTTTGC 1177787 Query 8102 CAGACGCCGACGCA 8115 ||||| ||||| || Sbjct 1177788 CAGACACCGACACA 1177801 Score = 136 bits (150), Expect = 5e-27 Identities = 267/387 (69%), Gaps = 6/387 (2%) Strand=Plus/Minus Query 7339 CGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGA 7398 ||| ||||| || ||||| || |||| || | |||||| |||||||| | | | || Sbjct 2145756 CGTACGCTTGGCACGCTCGCAGGCCGAGCGGAGACGACGGAGGGCACGAGCATCCTCAGA 2145697 Query 7399 AATATCTTTCTTATGTTTACGTTTA-AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAA 7456 ||||| || || | | | | ||||| | |||||| |||| | || | Sbjct 2145696 GATATCCAGGCTA-GTCTTCTTCTGGAACTCCTTCTTGAAGTGCTCGA-GAAGGTTGTTG 2145639 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||||||||| || || || || ||||| ||||| | || | ||| Sbjct 2145638 TCAAAGTCCTCACCACCCAAGTGGGTGTCACCGGCAGTCGCCTTGACGGCGAAAACACCA 2145579 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | || ||||| || || || || || ||||| ||||| || ||| Sbjct 2145578 CCAGTGATGTTGAGGAGGGAGACATCGAAAGTTCCTCCGCCGAGGTCGAAAATAAGGACG 2145519 Query 7577 TTCGTATCGTCGTCTTTGTTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| | || | ||| || |||||||||||| || || || || || || || || Sbjct 2145518 TTCTTCTCCGCA-CTTGATTGACGATCGAGACCGTAGGCAATGGCGGCGGCGGTAGGCTC 2145460 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || | ||||||||||| | | ||||||||||| || | || Sbjct 2145459 GTTGATGATACGGAGGACCTCAAGGCCAGCAATCGCGCCGGCATCTTTCGTAGCGAGACG 2145400 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||||| ||||| |||||||| ||||| Sbjct 2145399 TTGCGAGTCGTTGAAGTAGGCGGGGAC 2145373 >seq4 Length=2972551 Score = 95.1 bits (104), Expect = 2e-14 Identities = 184/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 105814 GCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACAC 105873 ||||| | | ||| | || | |||||| ||||||||| ||| ||||| ||||| Sbjct 1423899 GCACGAATGTTGTGGATGTTGATCCCAATGCCCCCAGCCGTCTTGCTGATCATGGCACAG 1423958 Query 105874 TCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACAC 105933 || || | || || ||||| ||||| || ||||| | || ||||| ||| Sbjct 1423959 TCCTTGAGAGTCGAATAGATACCCTCGATGGAGTCATCCTTCATACAAACAAGGAAGCAC 1424018 Query 105934 GATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAAC 105993 || |||||| || | || || ||||||||||| || || |||| ||||||| |||| Sbjct 1424019 GAGCTCATTTGAGGGTTAGGGGTGCCAGCATTGAAGAGGGTGGGTGATGCATGAGTGAAG 1424078 Query 105994 AAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATA 106053 ||| | || | | |||||||| ||||| | || || ||| |||||| ||| Sbjct 1424079 TAACGCTCGGACATGAGGTTGTATGTTTGAAGGACACGCTCGATGTCGGCTCCATGGATA 1424138 Query 106054 CCAATAGCGACGCGCATATAGAGATATTGGGG 106085 || | || || ||||| ||||| ||| || Sbjct 1424139 CCGACGGCAACACGCATGAGGAGATGTTGTGG 1424170 >seq9 Length=2326135 Score = 86.0 bits (94), Expect = 8e-12 Identities = 202/305 (66%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || ||||| || || || ||||| ||||| || || || |||||||| || Sbjct 450424 TTCTACCAGGCGTCGACGTCGGAGCTGTACGGCAAGGTCGTCGAGACTCCACAGTCGGAG 450483 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 || || || || |||||||| || || || || || || || || || | ||| | Sbjct 450484 AAGACCCCATTCTACCCGCGCTCCCCGTACGGCGTCGCGAAGCTGTACGGGTTCTGGATG 450543 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || | || || | || | || || |||| || |||||||| || | ||||||||| Sbjct 450544 ACGATCAACTACCGCGAGGCGTATGGCATGTACGCGTGCAATGGCATCCTCTTCAACCAC 450603 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAAT 22683 || || || | || || | ||||| || || || || || | || ||||| | Sbjct 450604 GAGTCGCCCCGCCGCGGCAGGACGTTCGTCACCCGCAAGATCACGCGCGCCGTCGCGGAC 450663 Query 22684 ATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGG 22743 ||| || || || | ||||| ||||| || ||||| || ||||| || || ||| Sbjct 450664 ATCCACCTTGGCAAGCAGCAGTGTTTGTACCTCGGCAACCTCGACGCGAAGCGTGACTGG 450723 Query 22744 GGTCA 22748 || || Sbjct 450724 GGACA 450728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131561491040