Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 154 2e-32 seq2 123 3e-23 >seq4 Length=2972551 Score = 154 bits (170), Expect = 2e-32 Identities = 236/336 (70%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || || ||| | || | || ||| |||| ||||| || || | |||| || ||| Sbjct 1423824 GGCACCAACGGTTACTCCAACGGAATTGTTCCTATGCTCCGTGTCTACGACGCTACCGCG 1423765 Query 111963 CGCTATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCA 112019 || ||||| | |||| ||| ||| || | |||| |||| || || || Sbjct 1423764 CGGTATGTCGATCAAGGTGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAACCC 1423705 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 |||||||| || ||| | |||||| | || |||| ||||| || | ||||||| Sbjct 1423704 TGGCACGCCGACATCTTCGAGTTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTT 1423645 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || ||| || ||||||| ||| || ||||| || ||||| ||||||||| | || ||| Sbjct 1423644 CGAGCCCGTGACCTCTTCTACGCGCTTTGGATCCCCGATCTGTTCATGAAGCGCGTCGAG 1423585 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 ||||||| ||||||||||| || ||| || | ||||| |||||| ||| | | | Sbjct 1423584 TCTGGTGGCAAATGGTCTCTCTTCTGCCCAAACGAAGCACCTGGTCTCCACGAAGTCTGG 1423525 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG 112235 ||||| |||||||| || |||||| |||||||| Sbjct 1423524 GGTGATGAGTTTGAGGCACTCTACGAGCAGTACGAG 1423489 Score = 89.7 bits (98), Expect = 6e-13 Identities = 168/247 (68%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 111625 TCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACG 111684 ||||||| || || ||||||||||||| | || || || ||| | | |||||| Sbjct 1424157 TCATGCGTGTTGCCGTCGGTATCCATGGAGCCGACATCGAGCGTGTCCTTCAAACATACA 1424098 Query 111685 ACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACAC 111744 || |||||| || |||| || ||| |||| ||||||||||| ||||| || | Sbjct 1424097 ACCTCATGTCCGAGCGTTACTTCACTCATGCATCACCCACCCTCTTCAATGCTGGCACCC 1424038 Query 111745 CAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCA 111804 | | || |||||| | || |||||| || | ||||| || || ||| | || | Sbjct 1424037 CTAACCCTCAAATGAGCTCGTGCTTCCTTGTTTGTATGAAGGATGACTCCATCGAGGGTA 1423978 Query 111805 TTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGC 111864 | || ||||||| || |||||| ||| ||| |||||| || || ||||| Sbjct 1423977 TCTATTCGACTCTCAAGGACTGTGCCATGATCAGCAAGACGGCTGGGGGCATTGGGATCA 1423918 Query 111865 ACATCCA 111871 ||||||| Sbjct 1423917 ACATCCA 1423911 >seq2 Length=3722621 Score = 123 bits (136), Expect = 3e-23 Identities = 179/247 (72%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 |||||||| |||||| | || | || || || | ||||| || || ||||| | Sbjct 2460985 CTCTTTGACGCCATCGAGACGATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCCTCCGC 2460926 Query 102150 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | ||| | || || || | || || || || || |||| || || ||| Sbjct 2460925 TGGATCTCTGACAAGAATTC-CGCT--TTCGCGGAACGCCTTGTCGCCTTCGCTGCTGTC 2460869 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 102265 ||||||||||||||||||||||||||| ||| |||| | |||||||||||||| || | Sbjct 2460868 GAGGGTATCTTCTTCTCTGGTTCCTTC-GCGTCTATCTTCTGGCTCAAGAAGCGCGGCTT 2460810 Query 102266 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 102325 ||||| |||||| ||||| |||||||| ||||| || |||||||| | ||| || Sbjct 2460809 GATGCCCGGTCTCACTTTCTCGAACGAGCTCATCTCGCGCGACGAGGGTATGCACACCGA 2460750 Query 102326 GTTTGCG 102332 |||||| Sbjct 2460749 CTTTGCG 2460743 Score = 93.3 bits (102), Expect = 5e-14 Identities = 242/361 (67%), Gaps = 10/361 (3%) Strand=Plus/Plus Query 101958 TTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCTTTCTATGCGTATCAATGTCATAAT 102017 ||| || | ||||| || || | || ||| ||| ||||||| | || | |||| || Sbjct 2462853 TTTTCTAACGAGGTTCAGGCCGCCGAGGCGCGATGCTTCTATGGCT-TCCAGATCATGAT 2462911 Query 102018 -GAAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGC 102076 |||| || || ||||| ||| ||||| |||| || || | ||| | Sbjct 2462912 CGAAAACGTCCACTCCGAGACCTACTCCCTTCTCATTGACACTTACATCAGGGACCCAGA 2462971 Query 102077 TGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGA 102136 |||| || | ||||| || |||||| | || | || || || | ||||| || || Sbjct 2462972 CGAGAGGACGTTCCTCTTCGACGCCATCGAGACTATACCCTGCATCAAGAAGAAGGCCGA 2463031 Query 102137 TTGGGCTATGAAG-TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCG 102192 |||||| || | | ||| | |||| |||| ||| || |||||||| || ||| Sbjct 2463032 TTGGGC-ATTACGCTGGATAGCTGATGACCAGTC-CGTG--TTCGCTGAGCGGCTGGTCG 2463087 Query 102193 CATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCA 102252 | || || ||| ||||| || |||||||| || | || | | || | ||||||| Sbjct 2463088 CCTTCGCCGCTGTAGAGGGCATATTCTTCTCCGGGTGTTTTGCCTCAATCTTCTGGCTCA 2463147 Query 102253 AGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 ||||||| || || ||||| || | ||||| |||||||| ||||| ||||| |||| Sbjct 2463148 AGAAGCGTGGGCTGATGCCCGGCTTGACGTTCTCGAACGAGCTCATCTCGCGTGATGAGG 2463207 Query 102313 G 102313 | Sbjct 2463208 G 2463208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741189552320