Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 125 8e-24 seq2 84.2 3e-11 seq23 82.4 9e-11 seq16 82.4 9e-11 seq10 82.4 9e-11 seq9 82.4 9e-11 seq6 82.4 9e-11 >seq4 Length=2972551 Score = 125 bits (138), Expect = 8e-24 Identities = 299/447 (67%), Gaps = 15/447 (3%) Strand=Plus/Plus Query 110407 GCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTC 110466 |||||||||||||||||| | || |||||| || | || | || || ||||| | | Sbjct 1423385 GCATCCTTATAGAGCATGAAAGGACCACCAGTCTCGATTTGGGCCTCCAGGATGGCGTAC 1423444 Query 110467 CATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTG 110523 || | | || | | | | | ||| | ||| ||| |||| || |||||||| | Sbjct 1423445 CAAAGCTTCTGAGCCTCG-ATAGTCTTCCGT--GCGCGACCCTCGCGCTCGTACTGCTCG 1423501 Query 110524 TACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAG 110583 || | ||||||| || | || | || || ||||| || | || || ||| Sbjct 1423502 TAGAGTGCCTCAAACTCATCACCCCAGACTTCGTGGAGACCAGGTGCTTCGTTTGGGCAG 1423561 Query 110584 AAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATC 110643 ||||| ||||| || ||||| ||| || | |||||||||||| || || ||||| | | Sbjct 1423562 AAGAGAGACCATTTGCCACCAGACTCGACGCGCTTCATGAACAGATCGGGGATCCAAAGC 1423621 Query 110644 GCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAA 110703 || |||| ||||||||| ||| |||| || | || ||||| ||| || || | Sbjct 1423622 GCGTAGAAGAGGTCACGGGCTCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGATG 1423681 Query 110704 AAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG- 110762 || || | ||| || | |||||| |||||||| |||| |||| | || | | || Sbjct 1423682 AACTCGAAGATGTCGGCGTGCCAGGGTTCGAGGTAGATGGCGAACGCGCC---AGGGCGC 1423738 Query 110763 -----ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATA 110817 || | || | ||||| || || || || | | |||| | ||||||||||| | Sbjct 1423739 TTGTTGCCACCTTGATCGACATACCGCGCGGTAGCGTCGTAGACACGGAGCATAGGAACA 1423798 Query 110818 ATTCCATCGGATTGACCATTTGTACCC 110844 ||||| | ||| | ||| || || ||| Sbjct 1423799 ATTCCGTTGGAGTAACCGTTGGTGCCC 1423825 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 110863 GCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||||||||| |||||| | || ||||| || || ||| ||| || || ||||| Sbjct 1423899 GCACGAATGTTGTGGATGTTGATCCCAATGCCCCCAGCCGTCTTGCTGATCATGGCACAG 1423958 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 || |||| || ||| ||||| || || || || |||| | || || ||||| Sbjct 1423959 TCCTTGAGAGTCGAATAGATACCCTCGATGGAGTCATCCTTCATACAAACAAGGAAGCAC 1424018 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAAC 111042 || ||| ||||| ||| || || ||||||||||| || |||| |||||| |||| Sbjct 1424019 GAGCTCATTTGAGGGTTAGGGGTGCCAGCATTGAAGAGGGTGGGTGATGCATGAGTGAAG 1424078 Query 111043 AGACCTTGGGACATCTTGTTGTATGT 111068 || | |||||| ||||||||| Sbjct 1424079 TAACGCTCGGACATGAGGTTGTATGT 1424104 >seq2 Length=3722621 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 1015919 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 1015860 Query 136775 TTGGGAACAGCTTTT 136789 |||| || ||||| Sbjct 1015859 TTGGCCACTTCTTTT 1015845 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 1027469 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 1027410 Query 136775 TTGG 136778 |||| Sbjct 1027409 TTGG 1027406 >seq23 Length=11628 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 2343 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 2284 Query 136775 TTGG 136778 |||| Sbjct 2283 TTGG 2280 >seq16 Length=533757 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 147668 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 147609 Query 136775 TTGG 136778 |||| Sbjct 147608 TTGG 147605 >seq10 Length=2285585 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 1322229 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 1322288 Query 136775 TTGG 136778 |||| Sbjct 1322289 TTGG 1322292 >seq9 Length=2326135 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 637710 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 637651 Query 136775 TTGG 136778 |||| Sbjct 637650 TTGG 637647 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 650859 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 650918 Query 136775 TTGG 136778 |||| Sbjct 650919 TTGG 650922 >seq6 Length=2725691 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 29576 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 29517 Query 136775 TTGG 136778 |||| Sbjct 29516 TTGG 29513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974851496800