Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 seq2 96.9 4e-15 >seq4 Length=2972551 Score = 138 bits (152), Expect = 1e-27 Identities = 305/452 (67%), Gaps = 9/452 (2%) Strand=Plus/Plus Query 106575 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAA 106634 ||||| ||||||||| ||||||||| | || || ||||| | || | || || | Sbjct 1423377 TGTTGGCCGCATCCTTATAGAGCATGAAAGGACCACCAGTCTCGATTTGGGCCTCCAGGA 1423436 Query 106635 TTGCCTTCCACA-CATCGGCGGCTGG-TACAATGGCGTTGGCCCGTCCCTCCGCCTCGTA 106692 | || | ||| | | || | | || | || | ||| || || ||||| |||||| Sbjct 1423437 TGGCGTACCAAAGCTTCTGAGCCTCGATAGTCTTCCGT--GCGCGACCCTCGCGCTCGTA 1423494 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 || |||||| || |||||||| |||||| | ||| |||||| ||||| | || Sbjct 1423495 CTGCTCGTAGAGTGCCTCAAACTCATCACCCCAGACTTCGTGGAGACCAGGTGCTTCGTT 1423554 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 ||| ||||| |||||||||| ||||| ||| || ||||||||||| || || || || Sbjct 1423555 TGGGCAGAAGAGAGACCATTTGCCACCAGACTCGACGCGCTTCATGAACAGATCGGGGAT 1423614 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||| || | | ||||| || | ||| |||| || | || ||||| || | Sbjct 1423615 CCAAAGCGCGTAGAAGAGGTCACGGGCTCGAACCTCCTCCTTGCCGTGGTTCTTGCGCAG 1423674 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC--- 106929 || | |||||| | ||| || |||||||| || || || |||| |||| | || Sbjct 1423675 GTCGATGAACTCGAAGATGTCGGCGTGCCAGGGTTCGAGGTAGATGGCGAACGCGCCAGG 1423734 Query 106930 -CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988 | | | | ||| |||||| ||||| ||||| || |||| | || || ||||| | Sbjct 1423735 GCGCTTGTTG-CCACCTTGATCGACATACCGCGCGGTAGCGTCGTAGACACGGAGCATAG 1423793 Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCC 107020 ||| ||| || | || | ||| || || ||| Sbjct 1423794 GAACAATTCCGTTGGAGTAACCGTTGGTGCCC 1423825 Score = 127 bits (140), Expect = 2e-24 Identities = 175/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTT 107110 ||||||| |||||||| ||||||||| ||| ||| ||||| ||| | ||||| Sbjct 1423911 TGGATGTTGATCCCAATGCCCCCAGCCGTCTTGCTGATCATGGCACAGTCCTTGAGAGTC 1423970 Query 107111 CCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGC 107170 ||||||||| | ||| ||||| ||||| | | ||||||||| | ||| || Sbjct 1423971 GAATAGATACCCTCGATGGAGTCATCCTTCATACAAACAAGGAAGCACGAGCTCATTTGA 1424030 Query 107171 GGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGAC 107230 || | || || ||||||||||||||||| |||| ||| ||| |||| || | |||| Sbjct 1424031 GGGTTAGGGGTGCCAGCATTGAAGAGGGTGGGTGATGCATGAGTGAAGTAACGCTCGGAC 1424090 Query 107231 ATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACA 107290 || || |||||| | | |||| || ||||| | || ||||| |||| ||| ||| Sbjct 1424091 ATGAGGTTGTATGTTTGAAGGACACGCTCGATGTCGGCTCCATGGATACCGACGGCAACA 1424150 Query 107291 CGCAT 107295 ||||| Sbjct 1424151 CGCAT 1424155 >seq2 Length=3722621 Score = 96.9 bits (106), Expect = 4e-15 Identities = 181/258 (70%), Gaps = 10/258 (4%) Strand=Plus/Plus Query 117260 TGAAGAGCTC-CACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTT 117318 |||||||| |||| |||| || ||| | |||||| || || || || || || || Sbjct 2460730 TGAAGAGCAAGCACG-CAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTC 2460788 Query 117319 GAGAAGCATAGGCCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGA 117377 ||||| || || ||||| | || |||||||| | ||| | |||| ||| ||| || Sbjct 2460789 GAGAAAGTGAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGC-GAAGGA 2460847 Query 117378 CCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCG 117437 || ||||||||||||||||| ||| || || || | |||||| || ||||| |||| Sbjct 2460848 ACCAGAGAAGAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAA--AGCG 2460905 Query 117438 AGACTTTGTGTCA---AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 || || ||||| | ||| | ||||| | |||||||||| || || || | Sbjct 2460906 -GAATTCTTGTCAGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGAT 2460964 Query 117495 AGTTTGGATGGCTTCAAA 117512 || | |||||| ||||| Sbjct 2460965 CGTCTCGATGGCGTCAAA 2460982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979649537440