Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5 143 2e-29 >seq5 Length=2861455 Score = 143 bits (158), Expect = 2e-29 Identities = 217/304 (71%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GAGG-TC 30101 ||||||||||||| | ||||||||| | ||| ||||| || | |||| | || | Sbjct 9279 GGGTTCCAGGCGCTGAGGATGATGCGACGGTCAGTTGGGTCGTGCTTGATTTTGCGGATG 9338 Query 30102 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTGT 30160 ||| | ||||| ||||| || ||| ||||||||||||| | ||| |||| || Sbjct 9339 CACTCC----TGCAGTTGATCGACGCCCTCTCCCGAGTAGTCTG-CATCACAGTCCTCGT 9393 Query 30161 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30220 ||| |||||||| || | ||| || || || || || || || ||||| ||||| | Sbjct 9394 ACTTCGCTCCGAAGTGGCGCCATTGAAAGCCATAGACGGGGCCAAGGTCACCCTCGCGTC 9453 Query 30221 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30280 || ||| ||| | ||| || | ||||| |||| |||||| ||||||||||||| | Sbjct 9454 GATGACCGAGGCCACGCTTCTCGAGGAAGTCCTTGGACCCGTTGCCGTCCCAGATCTTGA 9513 Query 30281 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 30340 | || ||| ||||||| || |||| |||||| || || ||||| || ||||||| Sbjct 9514 CGCCTTTCGCGGAGAGGAGCTTCGAGTCTGTGGAGCCGTGCACAAACCAGAGAAGCTCCT 9573 Query 30341 CCAC 30344 | || Sbjct 9574 CTAC 9577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408616823115788