Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 271 1e-67 >seq2 Length=3722621 Score = 271 bits (300), Expect = 1e-67 Identities = 394/556 (71%), Gaps = 3/556 (1%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| |||||||| |||||| || ||||| || ||||||| |||| |||| Sbjct 2460733 AGAGCAAGCACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGA 2460792 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | |||||| ||||| | || | || ||||||||||| || | |||||| || |||| Sbjct 2460793 AAGTGAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAG 2460852 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||| ||| || | || |||||| | |||| Sbjct 2460853 AGAAGAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAAAGCGGAATTCT 2460912 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| ||||||||| || |||||||| ||||||||||||||||| || |||||||| | Sbjct 2460913 TGTCAGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGA 2460972 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 |||| ||||| | || | || | | |||| | |||||| || || | Sbjct 2460973 TGGCGTCAAAGAGGTACTCACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGGG 2461032 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 ||| |||| || || | ||||| || ||| ||||| |||||||| | ||||| Sbjct 2461033 AGTAGGTCTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCCT 2461092 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | |||| || || ||||||| | ||| | || ||||| ||||| || || || | Sbjct 2461093 CGGCGGCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCG 2461152 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AG 48599 | || || ||||||||||||||||| | |||||||||||| | || | |||| Sbjct 2461153 AGGCGGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATCGTTGTTGAGCCTGT 2461212 Query 48600 CATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGA 48659 |||||| | || | || ||| || |||| || || |||||||||| || || Sbjct 2461213 TGTTCCAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAAGAAGCCT 2461272 Query 48660 GTGCTTTTTTGTACAT 48675 ||| || |||||||| Sbjct 2461273 CTGCCTTCTTGTACAT 2461288 Score = 190 bits (210), Expect = 4e-43 Identities = 383/563 (68%), Gaps = 15/563 (3%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || ||||| |||||| ||| || || || ||||||| |||| ||||| | Sbjct 2463229 CAAGCGAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTCGAGAACGTCAAG 2463170 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||| | ||| | || ||||||||||| |||| || ||| | || |||||||| Sbjct 2463169 CCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCAAAACACCCGGAGAAGAAT 2463110 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC-TGA 48309 |||||||| || || ||||| ||| |||| ||| ||| | || || ||| | | Sbjct 2463109 ATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCGA---ACACGGACTGGTCATCA 2463053 Query 48310 G--ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 | |||||| | ||||| || ||||||||||||||||| || || ||||| ||||| Sbjct 2463052 GCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGATGCAGGGTATAGTCTCGATGGCG 2462993 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCG 48424 |||||| | | | ||| ||| |||| | || || | |||| || | | Sbjct 2462992 TCGAAGAGGAACGTCCTCTCGTCTGGGTCCCTGATGTAAGTGTCAATGAGAAG---GGAG 2462936 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 || |||| ||||| || || || || ||||||||| || |||||| | ||||| Sbjct 2462935 TAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGAAGCATCGCGCCTCG 2462876 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 |||| || || | || || | ||| | || ||||| ||||| || || || || Sbjct 2462875 GCGGCCTGAACCTCGTTAGAAAACCGCTCGACGAGGTTCTCGTTGACGATACCGTCCGAG 2462816 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCA 48601 || ||||| ||||| ||||| | ||||| || |||||| | | ||||| || Sbjct 2462815 GCCGCAAAAAAGGCCAGGACGTAGGAGAGGAAGTGACGCTCGCTATCTGTGAGCTTCCCA 2462756 Query 48602 TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 |||||| | | | || | ||||| | ||||| || |||||||||||||| || Sbjct 2462755 TTCCAGTCGGGAATATCATGCGAGAGGTCGATCTCTTCGACCGTCCAGAAGGACGCTTGT 2462696 Query 48662 GCTTTTTTGTACATGCCCCATAT 48684 ||| |||||||| |||||| Sbjct 2462695 GCTCGCTTGTACATTTGCCATAT 2462673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530983511040