Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq9 105 9e-18 >seq9 Length=2326135 Score = 105 bits (116), Expect = 9e-18 Identities = 328/508 (65%), Gaps = 0/508 (0%) Strand=Plus/Minus Query 47863 TGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCA 47922 |||||||||||||| || || || || || || || ||||| | ||||| || Sbjct 450728 TGTCCCCAGTCACGCTTCGCGTCGAGGTTGCCGAGGTACAAACACTGCTGCTTGCCAAGG 450669 Query 47923 GAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGA 47982 ||| | | || | || ||||| || || || || || || || | || Sbjct 450668 TGGATGTCCGCGACGGCGCGCGTGATCTTGCGGGTGACGAACGTCCTGCCGCGGCGGGGC 450609 Query 47983 GATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTC 48042 || || || || || || || ||| | || || ||||| || || | || || ||||| Sbjct 450608 GACTCGTGGTTGAAGAGGATGCCATTGCACGCGTACATGCCATACGCCTCGCGGTAGTTG 450549 Query 48043 TTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGT 48102 | |||||| |||| || || || || || || || || || || || ||||| || Sbjct 450548 ATCGTCATCCAGAACCCGTACAGCTTCGCGACGCCGTACGGGGAGCGCGGGTAGAATGGG 450489 Query 48103 GTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGA 48162 || |||| | |||||||||||| ||||| || || || || || || || || Sbjct 450488 GTCTTCTCCGACTGTGGAGTCTCGACGACCTTGCCGTACAGCTCCGACGTCGACGCCTGG 450429 Query 48163 TAGATACGAACCCTATCTTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTG 48222 |||| || ||| | || | | | | || | ||| || |||| | ||| ||| Sbjct 450428 TAGAAGCGCACCACCTTCTCAAACCCGCACGTCCGAATTGCGTCGAGCAGGCGCAGCGTG 450369 Query 48223 CCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCTTTACATGACTC 48282 |||| || || | || || ||||||| |||||| ||||||||||| || || | Sbjct 450368 CCTAGCGCGTCGACGTCGCCTGTGTACTCGGCCATCTCGAACGAAACCTTGACGTGCGAC 450309 Query 48283 TGTGCCCCAAGATTATAAATCTCATCTGGTTGAACCTGCTGAATAACCCTCACTAAATTT 48342 ||||| || || || || | ||| || |||| | ||| | || | ||| Sbjct 450308 TGTGCGCCGAGGTTGTAGACCTCGGTCGGGCGAACGTTGGCAATGATGTAGACGAGGTTT 450249 Query 48343 GTAGAGTCTGTTAAGTCTCCATAATGCA 48370 ||||||||||| | ||| || || |||| Sbjct 450248 GTAGAGTCTGTCAGGTCGCCGTAGTGCA 450221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665493102285920