Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 129 7e-25 seq2 96.9 4e-15 seq9 82.4 9e-11 >seq4 Length=2972551 Score = 129 bits (142), Expect = 7e-25 Identities = 225/326 (69%), Gaps = 5/326 (2%) Strand=Plus/Minus Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 ||| || || ||| | || | || ||| |||| ||||| || || | |||| || || Sbjct 1423825 GGGCACCAACGGTTACTCCAACGGAATTGTTCCTATGCTCCGTGTCTACGACGCTACCGC 1423766 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 ||| ||||| |||||| | ||| | || || | |||| ||||| | |||| Sbjct 1423765 GCGGTATGTCGATCAAG-GTGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAAC 1423707 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | ||||| ||||| ||| | |||||| | || | || ||||| || | || |||| Sbjct 1423706 CCTGGCACGCCGACATCTTCGAGTTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGG 1423647 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 ||| | || ||||| | | || ||||| || || || ||||||||||| || | Sbjct 1423646 TTCGAGCCCGTGACCTCTTCTACGCGCTTTGGATCCCCGATCTGTTCATGAAGCGCGTCG 1423587 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 || ||||| |||||||||| ||||| ||| || | ||||| |||||| ||| | Sbjct 1423586 AGTCTGGTGGCAAATGGTCTCTCTTCTGCCCAAACGAAGCACCTGGTCTCCACGAAGTCT 1423527 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTAC 75823 |||||| |||||||| || |||||| Sbjct 1423526 GGGGTGATGAGTTTGAGGCACTCTAC 1423501 Score = 122 bits (134), Expect = 1e-22 Identities = 175/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||||| || || |||| ||||| || | ||||| || |||| | | |||||| Sbjct 1424157 TCATGCGTGTTGCCGTCGGTATCCATGGAGCCGACATCGAGCGTGTCCTTCAAACATACA 1424098 Query 75285 ACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACAC 75344 || |||||| | || |||| ||| ||| |||| ||||||||||||||||| || | Sbjct 1424097 ACCTCATGTCCGAGCGTTACTTCACTCATGCATCACCCACCCTCTTCAATGCTGGCACCC 1424038 Query 75345 CAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTA 75404 | | || || ||| | ||||||||| | | ||||| ||||| ||| | |||| Sbjct 1424037 CTAACCCTCAAATGAGCTCGTGCTTCCTTGTTTGTATGAAGGATGACTCCATCGAGGGTA 1423978 Query 75405 TCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGC 75464 ||||| ||||| | ||| ||||| ||| ||| ||||||||| |||||||| Sbjct 1423977 TCTATTCGACTCTCAAGGACTGTGCCATGATCAGCAAGACGGCTGGGGGCATTGGGATCA 1423918 Query 75465 ACATCCA 75471 ||||||| Sbjct 1423917 ACATCCA 1423911 >seq2 Length=3722621 Score = 96.9 bits (106), Expect = 4e-15 Identities = 181/258 (70%), Gaps = 10/258 (4%) Strand=Plus/Minus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 ||||| |||||| | || | || || || |||||||||| | ||||| | ||| Sbjct 2460982 TTTGACGCCATCGAGACGATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCCTCCGCTGG 2460923 Query 65050 TT---TGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAG 65106 | ||||| || || |||| ||||| || |||||| | || || || ||| ||| Sbjct 2460922 ATCTCTGACAAGAATTC-CGCT--TTCGCGGAACGCCTTGTCGCCTTCGCTGCTGTCGAG 2460866 Query 65107 GGTATCTTCTTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCAT 65165 |||||||||||||| || || ||| ||| |||| | ||| | |||||||| || | || Sbjct 2460865 GGTATCTTCTTCTCTGGTTCCTTC-GCGTCTATCTTCTGGCTCAAGAAGCGCGGCTTGAT 2460807 Query 65166 GCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTT 65225 ||| || || ||||| || || || || || || || |||||| | ||| || || Sbjct 2460806 GCCCGGTCTCACTTTCTCGAACGAGCTCATCTCGCGCGACGAGGGTATGCACACCGACTT 2460747 Query 65226 TGCCGTG-GAGCTCTTCA 65242 || |||| |||||||| Sbjct 2460746 TG-CGTGCTTGCTCTTCA 2460730 >seq9 Length=2326135 Score = 82.4 bits (90), Expect = 9e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 177781 GGTGATTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAA 177840 || || ||||||||||||||||| || ||| || ||||| ||||| | || ||||| Sbjct 450611 GGCGACTCGTGGTTGAAGAGGATGCCATTGCACGCGTACATGCCATACGCCTCGCGGTAG 450552 Query 177841 TTTTTGACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAG 177900 || | | |||| || || || | |||||| || ||| || |||||||| Sbjct 450551 TTGATCGTCATCCAGAACCCGTACAGCTTCGCGACGCCGTACGGGGAGCGCGGGTAGAAT 450492 Query 177901 GGTGTCTCCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGCT 177960 || |||| ||| | |||||||| || ||| || || ||| |||||| || || || Sbjct 450491 GGGGTCTTCTCCGACTGTGGAGTCTCGACGACCTTGCCGTACAGCTCCGACGTCGACGCC 450432 Query 177961 TGGTA 177965 ||||| Sbjct 450431 TGGTA 450427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568436689280