Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 114 4e-20 >seq1 Length=4606855 Score = 114 bits (126), Expect = 4e-20 Identities = 179/254 (70%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 302592 ACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACG 302651 ||||||||| || ||||| || | ||||| || || |||||||| ||||| |||| Sbjct 823335 ACGACGCTGGATGTAACCCGTCTCGGCGGTTTTGACGGCCGTATCAATGAGACCTTCACG 823276 Query 302652 ACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTC 302711 |||| |||| || |||||||| | ||||| || || || | | | | ||| |||| Sbjct 823275 ACCAGCCATCGCGTGGAAGAAGAACTCTTGAGGAGTGAGACCTCGCAGATATGAGTTCTC 823216 Query 302712 AACGAAACCACGCGCCTCGGGC--GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTG 302769 ||||| || ||||| || || ||| |||| ||| || ||||| |||||||| | | Sbjct 823215 GACGAACCCGCGCGCTTCTGGACTGAA--GTCGTCCTTCGTGAAGTGCGGCAGGGTACGG 823158 Query 302770 TTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATC 302829 | ||||| | ||||||||||| || || ||| |||||| || | || | | Sbjct 823157 TGGCGGAAGCCGAAGGGGATACGCTTGCCCTCCACGGACTGCTGCCCAACACAGACAGAC 823098 Query 302830 ATCTGCGAAATATT 302843 |||||||| || || Sbjct 823097 ATCTGCGAGATGTT 823084 Score = 102 bits (112), Expect = 2e-16 Identities = 127/174 (73%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || ||||||||||||||||||||||| || |||||||| |||||||| || ||| Sbjct 2466600 CACCATGCGAAATCATACAATCACGCTCCATCTCTCCGAAACGCAGACCACCGTCACGAC 2466659 Query 251546 CCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTT 251605 | ||||||| | || ||||| ||||| | || || || | || || Sbjct 2466660 TACGACCCTCGACCGGTTGACGTGTGAGGATCTGCACCGGGCCACGCGCACGCGAGTGGA 2466719 Query 251606 GCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||| || | ||||| |||||||||||||||||| ||| || |||| | ||| Sbjct 2466720 TCTTGTCGTCCACCATGTGCTTGAGACGCTGGTAGTATGTTGGGCCGAGGTAGA 2466773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814658204572