Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-27 seq4 120 4e-21 seq12 107 2e-17 seq1 100 3e-15 seq7 87.8 2e-11 >seq2 Length=3722621 Score = 141 bits (156), Expect = 1e-27 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 || ||| ||||| || |||||| || || ||||||||||||||||||||||| ||| Sbjct 2463584 GAAGTGGGCCTTCGCATACTCGGAGACACGTTTCTCGAAAAAGTTGGTCTTGCCCTGGAG 2463525 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 ||||||| ||||| | ||||||||| | | | |||||| || ||| |||||| Sbjct 2463524 TGAGATCATATCCATGAAGTCGAACGGGTTAGTTGAATGGTAGTGTTTCTCGTTTCCGAG 2463465 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 | ||||||| | ||| ||||| ||||||||||| |||||||| | | | ||||||| Sbjct 2463464 AGCTACGAGCAGTCTGTCTGCGACGAACTCGATGTATTGGCACATCAAGGCCGCGTTCAG 2463405 Query 868864 GCCGATGAGCG 868874 |||||||||| Sbjct 2463404 ACCGATGAGCG 2463394 Score = 138 bits (152), Expect = 1e-26 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| | ||| || ||| ||| |||||| ||||| |||||||||| |||||||||| Sbjct 2460390 GCCTTCGAGTAATCCGACACACGCTTCTCGAAGAAGTTAGTCTTGCCCTGGAGCGAGATC 2460449 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||| | | |||| ||| ||||| ||||||| | Sbjct 2460450 ATATCCATGAAGTCGAAGGGGTTTGTCACGCCGTAGGACTTCTCGCAACCGAGCGCGACA 2460509 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 |||||||||||||| || ||||||||||| ||||||||||| | ||||||||| ||| Sbjct 2460510 AGCAGGCGGTCGGCCACGAACTCGATGTATTGGCACATGAGCTTTGAGTTCATGCCAATG 2460569 Query 868871 AGCGCCACCGGCAGCG 868886 || || || || |||| Sbjct 2460570 AGTGCAACGGGGAGCG 2460585 Score = 123 bits (136), Expect = 3e-22 Identities = 206/291 (71%), Gaps = 15/291 (5%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | ||||| || | ||| |||||||| | ||||||||| Sbjct 2460761 ACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGTGAGACCGGGCATCAAGCCGCGCTT 2460820 Query 869239 CTTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 ||||||||| ||||| | ||| ||| || ||||| ||||| |||||||| || || | Sbjct 2460821 CTTGAGCCAGAAGATAGACGC-GAAGGAACCAGAGAAGAAGATACCCTCGACAGCAGCGA 2460879 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCG 869354 || ||| || || || || || | | || | ||||| |||||| | | Sbjct 2460880 AGGCGACAAGGCGTTCCGCGAAAGCG--GA----ATTCTTGTCAGAGATCCAGCGGAGGG 2460933 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCT 869414 ||||||||||||| ||| | | | || | ||| ||||||||| |||||||| || Sbjct 2460934 CCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGCGTCAAAGAGGTACTC-- 2460991 Query 869415 TTTCGGCC--GGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| |||||||||| ||||| ||||| ||||| || |||||||| Sbjct 2460992 ACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTAGGTCTC 2461042 Score = 107 bits (118), Expect = 2e-17 Identities = 177/248 (71%), Gaps = 7/248 (3%) Strand=Plus/Minus Query 869218 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAA 869277 ||||||||| || || |||||||||||||| ||||| | | |||| || ||||| || Sbjct 2463170 GCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCAAAACACCCGGAGAAGAA 2463111 Query 869278 GATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTT 869337 |||||||| || ||||| ||| ||| |||||||| || || | || | || Sbjct 2463110 TATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCGAACACGGACTGGTCATC--A 2463053 Query 869338 GTTGATCCA-CTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGG 869396 | | ||||| | | || ||||| |||||||| ||| | | | || | || ||||||| Sbjct 2463052 GCT-ATCCAGCGTAAT-GCCCAATCGGCCTTCTTCTTGATGCAGGGTATAGTCTCGATGG 2462995 Query 869397 CGCGAAAGAGG-TGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAA 869455 || |||||| |||| | ||| | |||||| ||| || ||||| || || || || Sbjct 2462994 CGTCGAAGAGGAACGTCC-TCTCGTCTGGGTCCCTGATGTAAGTGTCAATGAGAAGGGAG 2462936 Query 869456 TAGGTCTC 869463 |||||||| Sbjct 2462935 TAGGTCTC 2462928 Score = 104 bits (114), Expect = 3e-16 Identities = 176/252 (70%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || ||||||||||| || ||| ||||||||||| || | |||| || | ||| Sbjct 2461044 GAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCCTCGGCGGCCTGG 2461103 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||| || || | ||||||||| ||||||||||| ||||||||| Sbjct 2461104 ACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAG 2461163 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 || || ||||| || || || |||||||| |||| | ||||| ||||| Sbjct 2461164 AAGGCAAGGACATGGGAGACGAAATGGCGCTCATCGTTGTTGAGCCTGTTGTTCCAGT-C 2461222 Query 869810 ACGGTG-TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || | || | || |||| |||||| || ||||||| || ||||| ||||| || Sbjct 2461223 ATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAAGAAGCCTCTGCCTTCTT 2461282 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 2461283 GTACATTTGCCA 2461294 Score = 87.8 bits (96), Expect = 2e-11 Identities = 178/260 (68%), Gaps = 6/260 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||| ||| ||||| |||||||||||| || ||| | | |||| || | || Sbjct 2462926 GAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGAAGCATCGCGCCTCGGCGGCCTGA 2462867 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||||| || | ||||||||| ||||| ||||| ||| || ||| Sbjct 2462866 ACCTCGTTAGAAAACCGCTCGACGAGGTTCTCGTTGACGATACCGTCCGAGGCCGCAAAA 2462807 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC---CCAGTGG 869809 || |||||||||| || ||||| |||||| || ||||| | | ||||| | Sbjct 2462806 AAGGCCAGGACGTAGGAGAGGAAGTGACGCTCGCTATCTGTGAGCTTCCCATTCCAGTCG 2462747 Query 869810 ACGGTGTC-GGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || ||| |||||| | ||| ||| | ||||||| || || | || || Sbjct 2462746 GGAATATCATGCG-AGAGGTCGATCTCTTCGACCGTCCAGAAGGACGCTTGTGCTCGCTT 2462688 Query 869869 GTACATCTCCCATA-CTTGC 869887 |||||| | ||||| ||||| Sbjct 2462687 GTACATTTGCCATATCTTGC 2462668 >seq4 Length=2972551 Score = 120 bits (132), Expect = 4e-21 Identities = 109/135 (81%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 1627348 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTG-ATGACCTCGCACGCCTC 1627406 || ||||| | ||||||||| || || ||||||||| ||||| ||| | ||| | ||| Sbjct 1422666 AACTCGCCAGCGAGCACGCGACGGGTATAGATGTTGCTGGTGTATGGC-TCGAAGCACTC 1422724 Query 1627407 GGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTT 1627466 | |||||||||| |||||||| || | ||| || |||||| |||| |||||||||||||| Sbjct 1422725 GTTGTTGCCCAGAATCTGCGATGTGGAGGCGGTAGGCATGGGCGCGACGAGGAGCGAGTT 1422784 Query 1627467 GCGCAGGCCGTGCTG 1627481 | ||||||||||| Sbjct 1422785 CCTAAGGCCGTGCTG 1422799 Score = 118 bits (130), Expect = 1e-20 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 1628383 TCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCG 1628442 ||||| || || || || ||| || || ||||| ||||| | |||||| | | | || Sbjct 1423532 TCGTGGAGACCAGGTGCTTCGTTTGGGCAGAAGAGAGACCATTTGCCACCAGACTCGACG 1423591 Query 1628443 CGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCC 1628502 || ||| || || || |||| || ||||| |||||||| || || || |||| Sbjct 1423592 CGCTTCATGAACAGATCGGGGATCCAAAGCGCGTAGAAGAGGTCACGGGCTCGAACCTCC 1423651 Query 1628503 TCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCC 1628562 ||||||||||||||||| ||||||| | |||| |||||||||||||| || || Sbjct 1423652 TCCTTGCCGTGGTTCTTGCGCAGGTCGATGAACTCGAAGATGTCGGCGTGCCAGGGTTCG 1423711 Query 1628563 AGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||| ||| || ||||| ||||||| ||| || Sbjct 1423712 AGGTAGATGGCGAACGCGCCAGGGCGCTTGTTGCCACC 1423749 Score = 113 bits (124), Expect = 6e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 1627868 CGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGG 1627927 |||| ||||| |||||||| || | ||| || || || ||||||| ||||||| |||||| Sbjct 1423036 CGTCTGCGAGACCCTGCACACCAATGCCGATGGGACGATGGCGCATGTTCGAGCGGCGGG 1423095 Query 1627928 CCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 1627974 ||||||| | |||||||| |||| |||||| | ||||||||||||| Sbjct 1423096 CCTCGGGAATCGGGTAGTAGTTGGCGTCGATAATGCGGTTGAGGTTG 1423142 >seq12 Length=2030760 Score = 107 bits (118), Expect = 2e-17 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496 ||| ||||| ||||||| |||| || ||||||||||||||||||| || | ||||| Sbjct 1396016 GGCTTCGGTCGCGATGCGTTCGAAGATATCGTTGACAAACGAGTTCAGGATTGCCATCGC 1396075 Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||| || || |||||||||||||||||||||||| Sbjct 1396076 CTTGTTGGAAATACCAGTGTCGGGGTGCACCTGCTTGAGCAC 1396117 >seq1 Length=4606855 Score = 100 bits (110), Expect = 3e-15 Identities = 109/142 (77%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG-CCGT 19110 |||||||||||| ||||| |||||| |||||||| || | || ||||||||| |||| Sbjct 729329 CATCGGCGGCACCGTGACCTGCGTGATCCGCAACGTCCCCGTGGGGCTCGGCGAGCCCGT 729388 Query 19111 GCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGG 19170 | || |||||| ||||||| |||||| ||||| ||||| || | || || || |||| Sbjct 729389 G-TTCGACAAGCTCGAGGCGAAGCTCGCGCACGCGATGCTCTCCGTGCCCGCGACGAAGG 729447 Query 19171 GATTCGAGATTGGCAGCGGGTT 19192 |||||| | ||| ||| || Sbjct 729448 CGTTCGAGCTCGGCTCCGGCTT 729469 >seq7 Length=2576904 Score = 87.8 bits (96), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 1592218 CGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCG 1592277 |||| | || |||||| ||||||| |||||||||||||||||| | || ||||||||||| Sbjct 1067591 CGATGTGGGATGCAAGACTGTGGCGAACATGATCAAGGGCAAGACCCCTGAGGAGATCCG 1067650 Query 1592278 CAAGACCTTTAACATC 1592293 |||| ||| |||||| Sbjct 1067651 CAAGCTCTTCAACATC 1067666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107126397909452