Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 seq3 107 2e-18 seq1 105 6e-18 seq2 84.2 2e-11 >seq4 Length=2972551 Score = 138 bits (152), Expect = 1e-27 Identities = 507/784 (65%), Gaps = 20/784 (3%) Strand=Plus/Plus Query 138155 TATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCG 138214 |||| || || ||||| || || | ||||| || || | ||||| ||||| |||| Sbjct 1422307 TATCGACCGTGAACTTGATCGCCTGTGCGGCCGGGCGTGTGCGGAGATAGTACATGCCCG 1422366 Query 138215 TTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGTT 138274 | || | || || | |||| |||| | ||| || || | | ||| ||||| Sbjct 1422367 TCTTCAGACCCTTCTTCCAGCCGTAAAAGTGCATGCTCGTCAACTGCCCGTTCGTCGG-- 1422424 Query 138275 TCGC---CAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 ||| ||| | ||| | ||| || ||| |||||| ||||| || || || Sbjct 1422425 -CGCTTGCAGGTGGACGTTGAGCGACTGCGACTGGCAGATGAATGCGCCACGGTCCGCGG 1422483 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 | | || || | || || | |||||||| ||||||||||| |||| | | Sbjct 1422484 CGAGGTCAAGAACCTTCTTCTGTGAAATCTCCCAGACGGTCTTGTA--GATCGCCTTGAC 1422541 Query 138392 GTCG-CGG---TATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTT 138447 |||| ||| || ||| | || || || ||| ||||||| || || || ||| Sbjct 1422542 GTCGTCGGGGATAATGTCG--ATGTTCTGGATGGACCCGTTGTTGGCGATAATCATATTC 1422599 Query 138448 CTCATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATG 138507 ||||||||||||| |||| | || || | ||| | || | | | | Sbjct 1422600 TTCATGTCATCGTTCCACAGGCCGAGCTCGACGAGCTCGCGGAGGAGCCACGGGCACACG 1422659 Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || || || | || ||||| || |||||| ||||| | ||||| || Sbjct 1422660 ACCTGGAACTCGCCAGCGAGCACGCGACGGGTATAGATGTTGCTGGTGTATGGCTCGAAG 1422719 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| ||||||||||| | |||| ||||| |||||| ||| || | || Sbjct 1422720 CACTCGTTGTTGCCCAGAATCTGCGATGTGGAGGCGGTAGGCATGGGCGCGACGAGGAGC 1422779 Query 138628 GAATTCCGTAAACCGTG--AAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAAT 138685 || |||| | ||||| ||| || | ||||||| | ||||||||| | || Sbjct 1422780 GAGTTCCTAAGGCCGTGCTGAGCGACCTTGG--CCTTGAGACTGGCCCAGTCCCAAAGAT 1422837 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTT 138745 | |||| | | ||| | ||||| || | | ||| |||||||| || | Sbjct 1422838 CCGTAGGAGTGACGCCCCATAGGTCGTATTGGAGCTGGCCCTGGGACGCGGGACTACCCT 1422897 Query 138746 CGTACGAATCGTATACACCA-AACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804 |||| | ||||| |||| | || || |||| ||| || ||||||| || | Sbjct 1422898 CGTATGTCTCGTAGGGACCATCAGTC-TGTGCCATCTCACAACTTGCCTCGACGGCGGCG 1422956 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864 | ||| || || |||| |||||| |||||||| ||| |||||| || ||||| Sbjct 1422957 TGGTAGATTGTCTCGGAGATCTGCAGATTGAGCTTTCGCGCCTCGATAGAGTCAAACGGC 1423016 Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924 || |||||| | |||| ||||| || || || ||||| || | |||| || |||||| Sbjct 1423017 ATACGGAGCGCCATGAAGGCGTCTGCGAGACCCTGCACACCAATGCCGATGGGACGATGG 1423076 Query 138925 CGCA 138928 |||| Sbjct 1423077 CGCA 1423080 >seq3 Length=3223173 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | ||||| || || || || |||||||| || || || Sbjct 2802473 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAAGTCGAGTCCTCC 2802414 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || || || || || ||||| || Sbjct 2802413 GACACCATCGACAACGTGAAGGCGAAGATCCAAGATAAGGAGGGCATCCCGCCCGACCAG 2802354 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| |||||||| ||||||||||| | | | || || || ||| Sbjct 2802353 CAGCGTCTTATCTTCGCCGGGAAGCAGCTGGAGGACGGCCGTACTCTTTCCGACTACAAC 2802294 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| ||||| || || || ||| Sbjct 2802293 ATTCAGAAGGAGTCCACGCTCCAC 2802270 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| || || || || || || ||||| || || | || Sbjct 2802192 ATGCAAATCTTCGTAAAGACGCTGACGGGCAAGACGATCACTCTCGAGGTGGAGTCTTCC 2802133 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || ||||| || || Sbjct 2802132 GACACCATCGACAATGTCAAGGCGAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAG 2802073 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||| ||||||| | | | |||| || || ||| Sbjct 2802072 CAGCGCTTGATCTTTGCGGGCAAGCAGTTGGAGGACGGTCGCACCCTGTCTGACTACAAC 2802013 Query 24884 ATTCAAAAGGA 24894 ||||| ||||| Sbjct 2802012 ATTCAGAAGGA 2802002 >seq1 Length=4606855 Score = 105 bits (116), Expect = 6e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || ||| | || || || ||||| || ||||| || || | | Sbjct 1903761 ATGCAAATTTTCGTGAAGACGTTGACAGGAAAGACTATCACTCTCGAGGTCGAGTCTTCG 1903820 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| ||| |||| |||||||||||| ||||| || ||||| ||||| Sbjct 1903821 GACACGATCGACAACGTTAAGGCAAA-GATCCAAGACAAGGAAGGGATCCCTCCTGATCA 1903879 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | || ||||| ||||| ||||| |||||| | | |||| |||||||| Sbjct 1903880 GCAGCGCCTCATTTTTGCTGGGAAGCAGCTTGAGGATGGTCGCACGTTGTCCGATTATAA 1903939 Query 24883 CATTCAAAAGGA 24894 ||| || ||||| Sbjct 1903940 CATCCAGAAGGA 1903951 >seq2 Length=3722621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 126321 GATGTGCGAATATATAGAGTTCGTAGCGGACCGTTTGCTCGTCGAATTACGACAACCGAA 126380 ||||||| |||| || |||||||| || ||| | ||||||| | | || | ||| Sbjct 2463419 GATGTGCCAATACATCGAGTTCGTCGCAGACAGACTGCTCGTAGCTCTCGGAAACGAGAA 2463478 Query 126381 ACACTTTAATACACCCAATCCATTTAACTTTATGAACAATATTTCTCTCGAGGGAAAGAC 126440 ||||| || || | || || || |||| ||| | | || || ||| |||| ||||| Sbjct 2463479 ACACTACCATTCAACTAACCCGTTCGACTTCATGGATATGATCTCACTCCAGGGCAAGAC 2463538 Query 126441 TAACTTTTTCGAGAGACGTGTCGGAGAGTAT 126471 ||||||||||||| ||||||| |||||| Sbjct 2463539 CAACTTTTTCGAGAAACGTGTCTCCGAGTAT 2463569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449896722699680