Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 >seq1 Length=4606855 Score = 109 bits (120), Expect = 5e-19 Identities = 182/263 (69%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||| || || ||||||||||| | || || || | ||| |||||| |||||| || Sbjct 628047 GATCAGGTCCGTCTCCGGGTTCTTGCACGCCTTGCAGAGCACGAACTTGTCGATGAAGCC 627988 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || || || || | | ||| | ||||| | ||||||||||||| | || ||||| Sbjct 627987 GTCGAGAAGCTCGCGCAGCTTCGTCGCATCGTGCGCGCCGTTGACGATGTACCGATCGTT 627928 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | |||| | ||| |||||||| |||||||| || ||| |||| || || || | Sbjct 627927 CTTCTCGTCGAACGACGTCTGCGCGCCGAGCTCGCAGCCAAAGAACTTGGTGGGATACGT 627868 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || | ||||| ||| | || | |||||| | || |||||||| || Sbjct 627867 AGGGGGTCGGCTGAGCGCGCGGGCCACGTCAGACATGTTCGGAAGCACGGTCTTGATACC 627808 Query 34551 GTTGCCCTTTCCTTCGACCTTGG 34573 |||||||| || |||| |||| Sbjct 627807 ATTGCCCTTGCCCTCGATTTTGG 627785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840815084908