Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 158 8e-34 seq1 123 2e-23 seq9 82.4 5e-11 >seq3 Length=3223173 Score = 158 bits (174), Expect = 8e-34 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||||||||||||||| ||||| |||||||| || ||||| |||| Sbjct 2801698 AGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCATCC 2801757 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || ||||||||| |||| | ||||||||||| Sbjct 2801758 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCC 2801817 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | |||| || | ||| || || | ||| |||||| Sbjct 2801818 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAAGGTGATGGTC 2801877 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || |||||||| ||||| || ||||||||||| Sbjct 2801878 TTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 2801909 Score = 116 bits (128), Expect = 2e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | ||| ||||||||||||||| ||||| || || | || | || ||||| Sbjct 2802268 AGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGC 2802327 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| ||||||||||| || || |||||||| |||| | |||||||| || | || Sbjct 2802328 TGCTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATC 2802387 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | || | || || |||||| || | ||| |||||||| || Sbjct 2802388 TTCGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCG 2802447 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 || | |||||| || |||||||||||| Sbjct 2802448 GTCAAGGTCTTCACGAAGATCTGCATG 2802474 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||||||||| ||||| || ||| |||| | || |||| Sbjct 2801987 AGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCAAC 2802046 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || ||||||| || |||||||| | || | |||||||| || | || Sbjct 2802047 TGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATC 2802106 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| || | ||| || || | || || ||||| Sbjct 2802107 TTCGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTT 2802162 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || |||||||| ||||| ||||| Sbjct 2802163 GCCCGTCAGCGTCTTTACGAAGATTTGCAT 2802192 >seq1 Length=4606855 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||||||||||||| ||||| ||||| || || |||| | || |||| Sbjct 1904472 AGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCCAAC 1904413 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||| || || |||||||| |||| | ||||||||||| | || Sbjct 1904412 TGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTGTCCTGAATC 1904353 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | |||| || || |||||| || | || || ||||| ||| Sbjct 1904352 TTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCC 1904293 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||||||| || || |||||||| Sbjct 1904292 GTGAGGGTCTTGACGAAAATCTGCAT 1904267 Score = 122 bits (134), Expect = 6e-23 Identities = 158/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| |||| || ||||||||| || || ||||| || ||| | || | || Sbjct 1903744 AGGACCAAATGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGACCGTCC 1903685 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||||||||| ||||||||||| |||| | ||||| ||||| Sbjct 1903684 TCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGGGATGCCCTCTTTGTCC 1903625 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || ||||||| || | |||||| |||| || || Sbjct 1903624 TGAATCTTCGCCTTAAC--AT--TATCGATGGTGTCGGACGACTCGACCTCAAGAGTGAT 1903569 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| |||||||||||||| |||||||| ||||| Sbjct 1903568 AGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCAT 1903533 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||| || | || ||| ||||||| || |||||| || ||||| || ||||| Sbjct 1904265 CCTCCCCGCAGACGCAAGACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCCGAG 1904206 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || |||| || || ||||| || ||||||||||| ||||||||||| | || Sbjct 1904205 AGAGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGTGGG 1904146 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || || ||| | || | ||| | |||||| Sbjct 1904145 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCGACC 1904086 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | || || ||||| || || || ||||| || || |||||||| Sbjct 1904085 TCCAGCGTGATCGTCTTGCCAGTAAGCGTCTTCACGAAAATCTGCAT 1904039 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| |||| ||||||||| ||||| ||||||||||| |||| | || Sbjct 1903516 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGATAGAGTGCGACCGTCC 1903457 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 || || ||||| || |||||||| || || ||||| || Sbjct 1903456 TCGAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGATC 1903419 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||||||||||||| |||||||| || || | |||| |||| || || Sbjct 1903966 AGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCGGACAACGTGCGACCATCCTCAAGC 1903907 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || || || || || ||||| || | || | ||| |||||||| | || Sbjct 1903906 TGCTTCCCAGCAAAAATGAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCTTGGATC 1903847 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 ||| || ||| | |||| || | |||||| || | || || |||||||| Sbjct 1903846 TTTGCCTTAACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGAGTGATAGTCTTTCCT 1903787 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || || || ||||| Sbjct 1903786 GTCAACGTCTTCACGAAAATTTGCAT 1903761 >seq9 Length=2326135 Score = 82.4 bits (90), Expect = 5e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 |||| | ||| |||||||||||||| || |||||||| || |||| | || ||||| Sbjct 1957643 AGGTCGAGGGTACTCTCCTTCTGAATATTGTAGTCCGACAGTGTGCGGCCGTCCTCCAGC 1957702 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 || ||||| ||||| || || | ||||| ||| | || | |||||||| || | || Sbjct 1957703 TGTTTTCCAGCGAAAATGAGAAGCTGCTGATCTAGTGGAAGTCCCTCCTTCTCCTGGATG 1957762 Query 34892 TTTTGTTTGA 34901 || | ||||| Sbjct 1957763 TTGTATTTGA 1957772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692180776564