Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=4606855 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Minus Query 21743 CGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGG 21801 || ||||| | || || ||||||||| ||| || ||||| | |||| || || ||| Sbjct 2467113 CGTATACCGCAGATCGGTGACAAGTTCGCTTCACGCCATGGTC-AGAAGGGTACGATCGG 2467055 Query 21802 GATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCAT 21861 || | ||| || || ||||||||||||| | ||||| |||||||| ||||| Sbjct 2467054 TATCACCTACCGCCAGGAGGACATGCCATTCACCGCGGAGGGCATTACCCCCGATATCAT 2466995 Query 21862 CATCAACCCCAACTGCATTCCCTCCAGAATGACCATT 21898 ||||||||| || |||||||||| | ||||| ||| Sbjct 2466994 CATCAACCCACACGCCATTCCCTCCCGTATGACAATT 2466958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521544582986080