Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3 134 1e-26 seq1 113 4e-20 >seq3 Length=3223173 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| || | || ||| || |||| |||| |||||| ||| Sbjct 2801996 GTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCAACTGCTTGCCC 2802055 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| ||||| ||||||||||| | ||| | || |||||| ||| |||||| ||| Sbjct 2802056 GCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTG 2802115 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | |||||| || |||||||| | |||||||| || ||||||| || Sbjct 2802116 ACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCCGTCAGCGTC 2802175 Query 35720 TTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 2802176 TTTACGAAGATTTGCAT 2802192 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| || | | || ||| | || || |||||||| || Sbjct 2801713 GTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCG 2801772 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | ||||||||||| | |||| | |||||||||| |||||| |||| Sbjct 2801773 GCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTC 2801832 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | |||||| ||| || ||||||| ||||| || || ||||| | || Sbjct 2801833 A-CGTTGTCGATCGTGTCCGACGACTCAACCTCCAAGGTGATGGTCTTCCCCGTGAGCGT 2801891 Query 35719 TTTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 2801892 CTTGACGAAGATCTGCAT 2801909 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| |||| | || || |||| ||||||||||| || || || Sbjct 2802282 CTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGCTGCTTCCCGGCGAA 2802341 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||| || |||||| ||||| || Sbjct 2802342 GATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATCTTCGCCTTCA-CGT 2802400 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || || || | ||||| || || || ||||| || |||| Sbjct 2802401 TGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCA 2802460 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 2802461 CGAAGATCTGCAT 2802473 >seq1 Length=4606855 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 ||| |||||||| || |||||||| || | | || || |||| |||| |||||| || Sbjct 1904464 CGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCCAACTGCTTCCC 1904405 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 ||| || || | ||||||||||| | |||| | |||||||||| ||||| ||| Sbjct 1904404 CGCGAAGATGAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTGTCCTGAATCTTCGCCTT 1904345 Query 35659 CAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAG 35717 || |||| | | |||||| || || ||||||| ||||||||| || ||||| | | Sbjct 1904344 CA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCCGTGAGGG 1904286 Query 35718 TTTTCACAAATATCTGCAT 35736 | || || || |||||||| Sbjct 1904285 TCTTGACGAAAATCTGCAT 1904267 Score = 102 bits (112), Expect = 7e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| | | || || | || || |||||||| || || || Sbjct 1904230 CTCCTTTTGGATGTTGTAATCCGAGAGAGTACGACCATCCTCGAGCTGCTTGCCAGCGAA 1904171 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||||| | || | || |||||||||| ||||| ||||| || Sbjct 1904170 GATCAGACGTTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCA-CGT 1904112 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||||| ||||||||| || || || | || |||| Sbjct 1904111 TGTCGATGGTATCAGAAGACTCGACCTCCAGCGTGATCGTCTTGCCAGTAAGCGTCTTCA 1904052 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 1904051 CGAAAATCTGCATTC 1904037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450792720952480