Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 136 4e-27 seq1 122 9e-23 seq6 93.3 4e-14 seq2 82.4 8e-11 >seq3 Length=3223173 Score = 136 bits (150), Expect = 4e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| |||||||| ||||| ||||||||||||||| || || | ||| || | Sbjct 2802266 CGAGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCA 2802325 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| || || || || || | ||||||||| |||||||| ||||| || || ||||| | Sbjct 2802326 GCTGCTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGA 2802385 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || || || ||| | |||||||| || || || ||||| || ||||| || | Sbjct 2802386 TCTTCGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGC 2802445 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| || || || ||||| || ||||| Sbjct 2802446 CGGTCAAGGTCTTCACGAAGATCTGCAT 2802473 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| || ||| ||||| |||||||||||||| | |||| || ||| || | Sbjct 2801985 CGAGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCA 2802044 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 ||| ||||| ||||| ||||| |||||||| || || || ||||| || || || || | Sbjct 2802045 ACTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGA 2802104 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || ||||| ||| | |||||||| || ||||| |||||||| || || || | Sbjct 2802105 TCTTCGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTTGC 2802164 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || ||||| |||||||| Sbjct 2802165 CCGTCAGCGTCTTTACGAAGATTTGCAT 2802192 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||| ||||| || ||||||||||| Sbjct 2801683 CCACCACGGAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 2801742 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || || | ||||||||| || ||||| Sbjct 2801743 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGA 2801802 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | ||||| ||||| || || Sbjct 2801803 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACC 2801862 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | || || ||||| || ||||| Sbjct 2801863 TCCAAGGTGATGGTCTTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 2801909 >seq1 Length=4606855 Score = 122 bits (134), Expect = 9e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC-CAACGGTGTGAGAGTCGTCG 134564 ||||||| |||||| ||||| || ||||| || ||| ||||| || || || || Sbjct 1903968 CGAGGTGGAGCGTGCTCTCCTTCTGGATGTTATAATCGGACAACG-TGCGACCATCCTCA 1903910 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || |||||||| | ||||||||||| || || || ||||| || ||||| Sbjct 1903909 AGCTGCTTCCCAGCAAAAATGAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCTTGG 1903850 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || ||| | ||||| || || || || |||||||| || || || Sbjct 1903849 ATCTTTGCCTTAACGTTGTCGATCGTGTCCGAAGACTCGACCTCGAGAGTGATAGTCTTT 1903790 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || |||||||||||||| Sbjct 1903789 CCTGTCAACGTCTTCACGAAAATTTGCAT 1903761 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || ||||| || ||||| || || ||||||||| || ||| || ||| || ||||| Sbjct 1903735 TGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGACCGTCCTCAAGCTGC 1903676 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || |||| ||| ||||| || ||||| ||||| ||||| || ||||| || Sbjct 1903675 TTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGGGATGCCCTCTTTGTCCTGAATCTTC 1903616 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || || | ||||||||||| || || || ||||| || || || || || Sbjct 1903615 GCCTTAACATTATCGATGGTGTCGGACGACTCGACCTCAAGAGTGATAGTCTTGCCCGTG 1903556 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 1903555 AGGGTCTTGACAAAGATTTGCAT 1903533 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || ||||||||||| Sbjct 1903531 CCGCCACGGAGACGGAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAT 1903472 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| |||||||| |||||||| || || | |||||||||||||| || Sbjct 1903471 AGAGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAGATAAGGCGCTGCTGATCGGGAGGA 1903412 Query 134607 ATGC 134610 |||| Sbjct 1903411 ATGC 1903408 >seq6 Length=2725691 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| || ||||| ||||| || ||||||||||||| | Sbjct 356616 CCACCACGGAGGCGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTA 356675 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| |||| |||||||| ||||| || Sbjct 356676 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGGGGG 356735 Query 134607 ATGC 134610 |||| Sbjct 356736 ATGC 356739 >seq2 Length=3722621 Score = 82.4 bits (90), Expect = 8e-11 Identities = 114/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 21721 CAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGA 21780 || ||||| | |||||||| |||||||||||||| || | ||||| ||| |||||| Sbjct 2460741 CACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGTGAGA 2460800 Query 21781 CCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaaaaC 21840 |||||||| || || || || || | | || || | ||| ||| ||| || || || Sbjct 2460801 CCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAAGAAG 2460860 Query 21841 ACGCCCTCCACAATGGCGAACGCCACCATGCG--CCGCG 21877 | ||||| ||| ||||| || || | ||| ||||| Sbjct 2460861 ATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCG 2460899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397414473120