Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1 105 6e-18 seq3 86.0 5e-12 >seq1 Length=4606855 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | |||||||| | ||| || || || || |||||||||||| Sbjct 1903759 CCACCGCGGAGACGAAGGACCAAATGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGAA 1903700 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||| || ||||| || |||||| | || ||||| || || || ||||| Sbjct 1903699 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGGG 1903640 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||| || ||||| || | | || | ||||| | | || || Sbjct 1903639 ATGCCCTCTTTGTCCTGAATCTTCGCCTTAACATTATCGATGGTGTCGGACGACTCGACC 1903580 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| |||| |||||||| || || || ||||||||||||||| Sbjct 1903579 TCAAGAGTGATAGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCATA 1903532 >seq3 Length=3223173 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || |||||||| | ||||| | || |||||||| || |||||| | Sbjct 2801719 TCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAG 2801778 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||||||||| || || ||||| | |||||| || || |||||| |||| | | Sbjct 2801779 ATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG 2801838 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | ||||| || | || || | || ||||| || || || || Sbjct 2801839 TCGATCGTGTCCGACGACTCAACCTCCAAGGTGATGGTCTTCCCCGTGAGCGTCTTGACG 2801898 Query 27237 AAGATTTGCATA 27248 ||||| |||||| Sbjct 2801899 AAGATCTGCATA 2801910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933592093472