Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 138 1e-27 seq2 118 1e-21 >seq4 Length=2972551 Score = 138 bits (152), Expect = 1e-27 Identities = 310/461 (67%), Gaps = 15/461 (3%) Strand=Plus/Plus Query 118816 ACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACT 118875 |||| |||| ||||||||| || |||||| | || || ||||| |||||| || Sbjct 1423371 ACTTACTGTTGGCCGCATCCTTATAGAGCATGAAAGGACCACCAGTCTCGATTTGGGCCT 1423430 Query 118876 TGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGG--CGTTGGCTCGCCCCTCTT 118932 || || || | ||| | | || | || | | ||| ||| || || ||||| Sbjct 1423431 CCAGGATGGCGTACCAAAGCTTCTGAGCCTCG-ATAGTCTTCCGT--GCGCGACCCTCGC 1423487 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 |||||||| |||||| || |||||||| |||||| | | || ||| || |||| Sbjct 1423488 GCTCGTACTGCTCGTAGAGTGCCTCAAACTCATCACCCCAGACTTCGTGGAGACCAGGTG 1423547 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 | | | |||||||||||||||||||| ||||| ||| || ||||||||||| || | Sbjct 1423548 CTTCGTTTGGGCAGAAGAGAGACCATTTGCCACCAGACTCGACGCGCTTCATGAACAGAT 1423607 Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112 | |||||||| ||||| ||||||| || || ||| | || || | || || || Sbjct 1423608 CGGGGATCCAAAGCGCGTAGAAGAGGTCACGGGCTCGAACCTCCTCCTTGCCGTGGTTCT 1423667 Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 |||| || | || || | ||| || |||||||| ||||| ||||| | |||| Sbjct 1423668 TGCGCAGGTCGATGAACTCGAAGATGTCGGCGTGCCAGGGTTCGAGGTAGATGGCGA--- 1423724 Query 119173 ACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACAC 119226 || | | | || ||| | || | ||||||| ||| || |||| | |||| Sbjct 1423725 ACGCGCCAGGGCGCTTGTTGCCACCTTGATCGACATACCGCGCGGTAGCGTCGTAGACAC 1423784 Query 119227 GAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC 119267 | ||||| |||| || || | ||| | || || || ||| Sbjct 1423785 GGAGCATAGGAACAATTCCGTTGGAGTAACCGTTGGTGCCC 1423825 Score = 89.7 bits (98), Expect = 6e-13 Identities = 284/433 (66%), Gaps = 22/433 (5%) Strand=Plus/Plus Query 118155 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 118214 ||||| || ||||| ||| | |||||| ||| | ||||||||||| |||||||| Sbjct 1422666 AACTCGCCAGCGAGCACGCGACGGGTATAGATGTTGCTGGTGTATGGCTCGAAGCACTCG 1422725 Query 118215 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 118274 ||||| |||| || || | ||||||||| || |||||||| || | ||| || ||| Sbjct 1422726 TTGTTGCCCAGAATCTGCGATGTGGAGGCGGTAGGCATGGGCGCGACGAGGAGCGAGTTC 1422785 Query 118275 CGGAGACCCTTTTCCCTAATGCG---TT--CCTTGAGAGCGTCCCAGTCGTAGTTGAGCT 118329 | || || | || | ||| || |||||||| | ||||||| | || | Sbjct 1422786 CTAAGGCCGT----GCTGA-GCGACCTTGGCCTTGAGACTGGCCCAGTCCCA-AAGATCC 1422839 Query 118330 TT----GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCC 118385 | || | || ||| | || | ||||| || |||||||| || ||| Sbjct 1422840 GTAGGAGTGACGCC---CCATAGGTCGTATTGGAGCTGGCCCTGGGACGCGGGACTACCC 1422896 Query 118386 TCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCG 118445 || ||||||| || || || ||| || |||| || | || ||||||| ||| ||| Sbjct 1422897 TCGTATGTCTCGTAGGGACCATCAGTCTGTGCCATCTCACAACTTGCCTCGACGGCGGCG 1422956 Query 118446 TGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTT--GGCCTCGTCGGAATCAAACG 118503 || || ||||| || | || | ||| | || || |||||| || ||||||| Sbjct 1422957 TGGTAGATTGTCTCGGAGATCTGCAGATTGA--GCTTTCGCGCCTCGATAGAGTCAAACG 1423014 Query 118504 CGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 118563 | ||| | || || | || |||||||| || ||||| | ||| || || |||| Sbjct 1423015 GCATACGGAGCGCCATGAAGGCGTCTGCGAGACCCTGCACACCAATGCCGATGGGACGAT 1423074 Query 118564 GTCTCATATTAGA 118576 | | ||| || || Sbjct 1423075 GGCGCATGTTCGA 1423087 >seq2 Length=3722621 Score = 118 bits (130), Expect = 1e-21 Identities = 349/526 (66%), Gaps = 19/526 (4%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||||||| || |||||||| || |||||||| ||||| Sbjct 2460744 GCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGTGAGACCG 2460803 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||| | || |||||||| | |||||| || | || || |||||||||||||| Sbjct 2460804 GGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAAGAAGATA 2460863 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT-TTGT-ATCAA 130193 ||||| ||| ||||| || | || || || || || ||||| | | |||| | | Sbjct 2460864 CCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAA--AGCGGAATTCTTGTCAGAGA 2460921 Query 130194 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 130253 ||| | ||||| | ||||| |||| ||| || |||| |||| ||| || |||| Sbjct 2460922 TCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGCGTCAA 2460981 Query 130254 AGAGTTCCT--TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 130311 |||| | || | ||| || || |||||||| |||| ||||| || || || Sbjct 2460982 AGAGGTACTCACGCTGCCTG--GGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTAGGT 2461039 Query 130312 TTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 130370 ||| ||||| | | ||| || | || | |||||||| |||| || ||| Sbjct 2461040 CTCGGAATGGATGTTCTCCATCAT-GATTTGGAAGCCGTAGAAACAGCGGGCCTCGGCGG 2461098 Query 130371 TCTGTACCTCATCTGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACC 130427 ||| ||||| | || | || | | || | ||||| || || || || || Sbjct 2461099 CCTGGACCTCGT-TGGAGAAACG--CTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGG 2461155 Query 130428 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCT 130484 | || || || || |||| || | ||| | | |||| | ||| || | | | Sbjct 2461156 CGGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATCGTTGTTGAGCCTGTTGT 2461215 Query 130485 TCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||||| | |||||||| || ||||| | |||||| |||||||| Sbjct 2461216 TCCAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCA 2461261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433994051360