Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 165 9e-36 seq2 123 3e-23 >seq4 Length=2972551 Score = 165 bits (182), Expect = 9e-36 Identities = 307/444 (69%), Gaps = 9/444 (2%) Strand=Plus/Minus Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 ||| || || ||| | || | || ||| |||| ||||| || || | |||| || || Sbjct 1423825 GGGCACCAACGGTTACTCCAACGGAATTGTTCCTATGCTCCGTGTCTACGACGCTACCGC 1423766 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627 ||| ||||| |||||| ||| | | | | || | |||| |||| || || | Sbjct 1423765 GCGGTATGTCGATCAAGGTGG-CAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAAC 1423707 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||||| || ||| | |||||| | || |||| ||||| || | ||||||| Sbjct 1423706 CCTGGCACGCCGACATCTTCGAGTTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGG 1423647 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| || ||||||| ||| || ||||| || ||||| ||||||||| | || | Sbjct 1423646 TTCGAGCCCGTGACCTCTTCTACGCGCTTTGGATCCCCGATCTGTTCATGAAGCGCGTCG 1423587 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 || ||||||| ||||||||||| || ||| || | |||||||||||| ||| | | Sbjct 1423586 AGTCTGGTGGCAAATGGTCTCTCTTCTGCCCAAACGAAGCACCTGGTCTCCACGAAGTCT 1423527 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG-CG 104866 |||||| |||||||| || || ||| |||||||| || ||||| || || | | Sbjct 1423526 GGGGTGATGAGTTTGAGGCACTCTACGAGCAGTACGAGCGCGAGGGTCGCGC-ACGGAAG 1423468 Query 104867 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || | | || | || | | ||| | || || || || | |||| |||||||||| Sbjct 1423467 ACTAT-CGAGGCTCAGAAGCTTTGGTACGCCATCCTGGAGGCCCAAATCGAGACTGGTGG 1423409 Query 104926 ACCATACATGCTTTACAAAGACGC 104949 || | |||||| || || || || Sbjct 1423408 TCCTTTCATGCTCTATAAGGATGC 1423385 Score = 134 bits (148), Expect = 2e-26 Identities = 178/247 (72%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 104235 TCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACG 104294 ||||||| || ||| ||||||| ||||| | ||||| || |||| | | |||||| Sbjct 1424157 TCATGCGTGTTGCCGTCGGTATCCATGGAGCCGACATCGAGCGTGTCCTTCAAACATACA 1424098 Query 104295 ACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACAC 104354 || |||||| | || |||| ||| ||| |||| ||||||||||||||||| || | Sbjct 1424097 ACCTCATGTCCGAGCGTTACTTCACTCATGCATCACCCACCCTCTTCAATGCTGGCACCC 1424038 Query 104355 CAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTA 104414 | | || |||||| | ||||||||| | | ||||| ||||| ||| | |||| Sbjct 1424037 CTAACCCTCAAATGAGCTCGTGCTTCCTTGTTTGTATGAAGGATGACTCCATCGAGGGTA 1423978 Query 104415 TCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGC 104474 ||||| ||||| | ||| ||||| ||| ||| ||||||||| |||||||| Sbjct 1423977 TCTATTCGACTCTCAAGGACTGTGCCATGATCAGCAAGACGGCTGGGGGCATTGGGATCA 1423918 Query 104475 ACATCCA 104481 ||||||| Sbjct 1423917 ACATCCA 1423911 >seq2 Length=3722621 Score = 123 bits (136), Expect = 3e-23 Identities = 179/247 (72%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 |||||||| |||||| | || | || || || | ||||| || || ||||| | Sbjct 2460985 CTCTTTGACGCCATCGAGACGATCCCTTGCATCAAGAAGAAGGCCGACTGGGCCCTCCGC 2460926 Query 94774 TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | ||| | || || || | || || || || || |||| || || ||| Sbjct 2460925 TGGATCTCTGACAAGAATTC-CGCT--TTCGCGGAACGCCTTGTCGCCTTCGCTGCTGTC 2460869 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCT 94889 ||||||||||||||||||||||||||| ||| |||| | |||||||||||||| || | Sbjct 2460868 GAGGGTATCTTCTTCTCTGGTTCCTTC-GCGTCTATCTTCTGGCTCAAGAAGCGCGGCTT 2460810 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 94949 ||||| |||||| ||||| |||||||| ||||| || |||||||| | ||| || Sbjct 2460809 GATGCCCGGTCTCACTTTCTCGAACGAGCTCATCTCGCGCGACGAGGGTATGCACACCGA 2460750 Query 94950 GTTTGCG 94956 |||||| Sbjct 2460749 CTTTGCG 2460743 Score = 96.9 bits (106), Expect = 4e-15 Identities = 243/361 (67%), Gaps = 10/361 (3%) Strand=Plus/Plus Query 94582 TTTGCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAAT 94641 ||| || | ||||| || || | || ||| ||| |||||||| | ||| |||| || Sbjct 2462853 TTTTCTAACGAGGTTCAGGCCGCCGAGGCGCGATGCTTCTATGGCTTCCAGA-TCATGAT 2462911 Query 94642 -GAAATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGC 94700 |||| || || ||||| ||| ||||| |||| || || | ||| | Sbjct 2462912 CGAAAACGTCCACTCCGAGACCTACTCCCTTCTCATTGACACTTACATCAGGGACCCAGA 2462971 Query 94701 TGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGA 94760 |||| || | ||||| || |||||| | || | || || || | ||||| || || Sbjct 2462972 CGAGAGGACGTTCCTCTTCGACGCCATCGAGACTATACCCTGCATCAAGAAGAAGGCCGA 2463031 Query 94761 TTGGGCTATGAAG-TGGTT---TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCG 94816 |||||| || | | ||| | |||| |||| ||| || |||||||| || ||| Sbjct 2463032 TTGGGC-ATTACGCTGGATAGCTGATGACCAGTC-CGTG--TTCGCTGAGCGGCTGGTCG 2463087 Query 94817 CATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCA 94876 | || || ||| ||||| || |||||||| || | || | | || | ||||||| Sbjct 2463088 CCTTCGCCGCTGTAGAGGGCATATTCTTCTCCGGGTGTTTTGCCTCAATCTTCTGGCTCA 2463147 Query 94877 AGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGG 94936 ||||||| || || ||||| || | ||||| |||||||| ||||| ||||| |||| Sbjct 2463148 AGAAGCGTGGGCTGATGCCCGGCTTGACGTTCTCGAACGAGCTCATCTCGCGTGATGAGG 2463207 Query 94937 G 94937 | Sbjct 2463208 G 2463208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259662641440