Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5 138 9e-28 >seq5 Length=2861455 Score = 138 bits (152), Expect = 9e-28 Identities = 216/304 (71%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GAGG-TC 30174 ||||||||||||| | ||||||||| | ||| ||||| || | |||| | || | Sbjct 9279 GGGTTCCAGGCGCTGAGGATGATGCGACGGTCAGTTGGGTCGTGCTTGATTTTGCGGATG 9338 Query 30175 CACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTGT 30233 ||| | ||||| ||||| || ||| ||||||||||||| | ||| |||| || Sbjct 9339 CACTCC----TGCAGTTGATCGACGCCCTCTCCCGAGTAGTCTG-CATCACAGTCCTCGT 9393 Query 30234 ACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCC 30293 ||| |||||||| || | ||| || || || || || || || ||||| ||||| | Sbjct 9394 ACTTCGCTCCGAAGTGGCGCCATTGAAAGCCATAGACGGGGCCAAGGTCACCCTCGCGTC 9453 Query 30294 TGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA 30353 || ||| ||| | ||| || | ||||| |||| |||||| ||||||||||||| | Sbjct 9454 GATGACCGAGGCCACGCTTCTCGAGGAAGTCCTTGGACCCGTTGCCGTCCCAGATCTTGA 9513 Query 30354 CCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 30413 | || ||| | ||||| || |||| |||||| || || ||||| || ||||||| Sbjct 9514 CGCCTTTCGCGGAGAGGAGCTTCGAGTCTGTGGAGCCGTGCACAAACCAGAGAAGCTCCT 9573 Query 30414 CCAC 30417 | || Sbjct 9574 CTAC 9577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309627502352