Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 6e-12 >seq5 Length=2861455 Score = 86.0 bits (94), Expect = 6e-12 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 6850 CTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCC 6909 |||||| || || | |||| |||||| ||||| || || | || |||| ||| || Sbjct 9344 CTGCAGTTGATCGACGCCCTCTCCCGAGTAGTCTGCATCACAGTCCTCGTACTTCGCTCC 9403 Query 6910 AAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAA 6969 ||||| | ||| || || || ||||| ||||| | ||| ||||| ||| || Sbjct 9404 GAAGTGGCGCCATTGAAAGCCATAGACGGGGCCAAGGTCACCCTCGCGTCGATGACCGAG 9463 Query 6970 CCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGA 7029 || ||||| || || ||||| ||||||| ||||||||||||| || || | Sbjct 9464 GCCACGCTTCTCGAGGAAGTCCTTGGACCCGTTGCCGTCCCAGATCTTGACGCCTTTCGC 9523 Query 7030 CGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCC 7089 ||||| ||| | || |||| || ||| ||||| || |||||||| || | ||| Sbjct 9524 GGAGAGGAGCTTCGAGTCTGTGGAGCCGTGCACAAACCAGAGAAGCTCCTCTACTATGCC 9583 Score = 86.0 bits (94), Expect = 6e-12 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 34256 GGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCG 34315 ||| | || |||||||| || ||||| ||| || |||| || | ||| ||||| Sbjct 9583 GGCATAGTAGAGGAGCTTCTCTGGTTTGTGCACGGCTCCACAGACTCGAAGCTCCTCTCC 9524 Query 34316 TCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG 34375 | || || ||||||||||||| ||||||| ||||| || || ||||| || Sbjct 9523 GCGAAAGGCGTCAAGATCTGGGACGGCAACGGGTCCAAGGACTTCCTCGAGAAGCGTGGC 9464 Query 34376 TTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTT 34435 || ||| ||||| ||| | ||||| ||||| || || || ||| | ||||| Sbjct 9463 CTCGGTCATCGACGCGAGGGTGACCTTGGCCCCGTCTATGGCTTTCAATGGCGCCACTTC 9404 Query 34436 GGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAG 34495 || ||| |||| || | || || ||||| |||||| |||| | || || |||||| Sbjct 9403 GGAGCGAAGTACGAGGACTGTGATGCAGACTACTCGGGAGAGGGCGTCGATCAACTGCAG 9344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261525888320