Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq2 129 5e-25 >seq2 Length=3722621 Score = 129 bits (142), Expect = 5e-25 Identities = 341/517 (66%), Gaps = 13/517 (3%) Strand=Plus/Minus Query 4584 ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATA 4643 || || ||||| || ||||| || |||||||| | || | ||| || ||||| || || Sbjct 2463193 ATGAGCTCGTTCGAGAACGTCAAGCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATT 2463134 Query 4644 GCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGAC 4703 | |||||| |||| || ||||||||||| ||||| ||||| || || || | || Sbjct 2463133 GAGGCAAAACACCCGGAGAAGAATATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCA 2463074 Query 4704 CCGA--ACGAGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAA 4761 ||| ||| |||| | || ||||| ||||||||| | || || ||||| | Sbjct 2463073 GCGAACACGGACTGG--TCATCAGCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGA 2463016 Query 4762 CGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTTTCAAATGGGTCTTGAA 4818 ||| || || || | || |||| || || | || | || |||||| | Sbjct 2463015 TGCAGGGTATAGTCTCGATGGCGTCGAAGAGGAACGTCCTCTCGTC---TGGGTCCCTGA 2462959 Query 4819 TATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAA 4878 | |||||||| || || ||| || | || || || | ||||| || ||||| | Sbjct 2462958 TGTAAGTGTCAATGAGAAGGGAGTAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGA 2462899 Query 4879 ATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGT 4938 | || || ||||||| || || | | ||||| |||||| |||| | || || | || Sbjct 2462898 AGCCATAGAAGCATCGCGCCTCGGCGGCCTGAACCTCGTTAGAAAACCGCTCGACGAGGT 2462839 Query 4939 TTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACT 4998 | ||||| || |||||||| ||| |||||||| |||| || | || | |||| Sbjct 2462838 TCTCGTTGACGATACCGTCCGAGGCCGCAAAAAAGGCCAGGACGTAGGAGAGGAAGTGAC 2462779 Query 4999 GTTCGTCAGGCTTAAGTTT---TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTT 5055 | ||| | | || || ||||||| ||| | ||| | | | || | |||| Sbjct 2462778 GCTCGCTATCTGTGAGCTTCCCATTCCAGTCGGGAATATCATGCGAGAGGTCGATCTCTT 2462719 Query 5056 CAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 | || ||||| || ||||||| ||| |||||||| Sbjct 2462718 CGACCGTCCAGAAGGACGCTTGTGCTCGCTTGTACAT 2462682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048788071948