Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq2 109 8e-19 >seq2 Length=3722621 Score = 109 bits (120), Expect = 8e-19 Identities = 261/391 (67%), Gaps = 9/391 (2%) Strand=Plus/Minus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || || | || ||||| || |||||||| |||||||| || || | || Sbjct 2463187 TCGTTCGAGAACGTCAAGCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCA 2463128 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTA- 46790 ||| | || || ||||||||||| |||||||| ||||| ||||| || | ||| || | Sbjct 2463127 AAACACCCGGAGAAGAATATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCGAAC 2463068 Query 46791 ----ACTGGCATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAG 46846 ||||| |||| | ||||| | | |||||||| ||||| ||||| | || | Sbjct 2463067 ACGGACTGG--TCATCAGCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGATGCAGG 2463010 Query 46847 GCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTAT 46906 | || || || || || | ||||| || | | || || || | | || || | Sbjct 2463009 GTATAGTCTCGATGGCGTCGAAGAGGAACGTCCTCTCGTCTGGGTCCCTGATGTAAGTGT 2462950 Query 46907 CTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAA 46966 | || | ||| || | || || || | |||||| || ||||| || || || | Sbjct 2462949 CAATGAGAAGGGAGTAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGA 2462890 Query 46967 AACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTC 47025 | |||| || || | ||| ||||| || |||| || || ||| | ||||| || Sbjct 2462889 AGCATCGCGCCTCGGCGGCCTGAACCTCGTTAGAAAACCGCTC-GACGAGGTTCTCGTTG 2462831 Query 47026 ACTATTCCATCACTAGCAGCAAAAAATGCCA 47056 || || || || || |||||||| |||| Sbjct 2462830 ACGATACCGTCCGAGGCCGCAAAAAAGGCCA 2462800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933009777920