Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1 116 9e-21 seq3 114 3e-20 >seq1 Length=4606855 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | |||||| || ||||| || ||||| ||||| |||| | || | || || Sbjct 1903744 AGGACCAAATGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGACCGTCC 1903685 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||||| | || ||| || || || || Sbjct 1903684 TCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGGGATGCCCTCTTTGTCC 1903625 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | | |||| || ||| || |||||||| ||||| Sbjct 1903624 TGAATCTTCGCCTTAACATTATCGATGGTGTCGGACGACTCGACCTCAAGAGTGATAGTC 1903565 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||| || |||| ||||| Sbjct 1903564 TTGCCCGTGAGGGTCTTGACAAAGATTTGCAT 1903533 Score = 114 bits (126), Expect = 3e-20 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| ||||| || ||||| ||||||||||||||||| | | ||| | ||||| || Sbjct 1904248 GACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCCGAGAGAGTACGACCATCCTC 1904189 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || || || |||||||| || | |||||||| | | ||| || ||||| || || Sbjct 1904188 GAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTG 1904129 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || || || | || | | | || ||| ||| || || || || || || || Sbjct 1904128 AATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCGACCTCCAGCGTGATCGTCTT 1904069 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || || ||||||||||| | ||||||| Sbjct 1904068 GCCAGTAAGCGTCTTCACGAAAATCTGCATT 1904038 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || |||||||| ||||||| || || | ||||| || || ||||| || || Sbjct 1903952 CTCCTTCTGGATGTTATAATCGGACAACGTGCGACCATCCTCAAGCTGCTTCCCAGCAAA 1903893 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 || || | |||||| || | | ||| |||||||| ||||| || ||| || || | Sbjct 1903892 AATGAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCTTGGATCTTTGCCTTAACGTT 1903833 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | |||| ||| ||| || || ||||| ||||| || || || | |||||||| Sbjct 1903832 GTCGATCGTGTCCGAAGACTCGACCTCGAGAGTGATAGTCTTTCCTGTCAACGTCTTCAC 1903773 Query 152093 GAAGACCTGCAT 152104 ||| | ||||| Sbjct 1903772 GAAAATTTGCAT 1903761 >seq3 Length=3223173 Score = 114 bits (126), Expect = 3e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || || || || ||||| || || |||||||| |||| | ||| | || || || || Sbjct 2802268 AGGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGC 2802327 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 ||||||||||||||||| | ||||||||| | || ||| || ||||| ||||| || Sbjct 2802328 TGCTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATC 2802387 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || || | || | | |||| || ||| ||||| || || || || ||||| Sbjct 2802388 TTCGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCG 2802447 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || | ||||||||||||| |||||| Sbjct 2802448 GTCAAGGTCTTCACGAAGATCTGCAT 2802473 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| || || || ||| || ||||||||||| || | | || | Sbjct 2801691 GAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCG 2801750 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||| || || || ||||||||||| || | ||||||||| | || || || || Sbjct 2801751 CCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTC 2801810 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || | || | |||| || ||| || || | || Sbjct 2801811 CTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAAGGT 2801870 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||| ||||||| |||||| Sbjct 2801871 GATGGTCTTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 2801909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818493800676