Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq23 152 5e-32 >seq23 Length=563827 Score = 152 bits (168), Expect = 5e-32 Identities = 389/581 (67%), Gaps = 12/581 (2%) Strand=Plus/Plus Query 16707 TAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAG-CTGAAAAT 16765 ||||||| |||| || ||| || |||||||||||||| |||||||| |||| | | ||| Sbjct 139167 TAGTTTTACCCTGTAAAGAAATGTTCTCCATGAAATCGAAAGGATTCGTAGAGTTATAAT 139226 Query 16766 ATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCAC 16825 ||| | || || || | | | | |||||| || || ||||| |||||||| ||| Sbjct 139227 GTTTGTCATTA-CCAAGAGAGACCAAAAGTCTATCAGCAACGAATTCAATATATTGACAC 139285 Query 16826 ATTAATTCGCAGTTCATTCCTATAAGA-CGTACCGGAAGAGCTTCCGTCAAAAATCGTTG 16884 ||||||| ||||||||| || ||| || | || | ||| || |||| || || Sbjct 139286 ATTAATTTAGCGTTCATTCCAATGAGAGCGCA-AGGTAAAGCGTCTCTCAAGAAAGCCTG 139344 Query 16885 CTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGA--CGGTGTATGT 16942 || || |||| ||||| |||| ||| ||| ||| || ||| | | | | Sbjct 139345 TTCAATTCCAACAGCTTCAGTAATGATAGCCAAAAC-CGTATCT-GGATGAGCTCTCTTC 139402 Query 16943 TTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATA 17002 || | ||| || | | ||| ||||||||| |||||| || || ||||| || Sbjct 139403 TTTAAATGAGAGAATAATAAACAAGCGAAATCGGTATGTAAACCTTCATCTCTTGAAATC 139462 Query 17003 AGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCG 17062 | |||||||||||| ||||| || ||||| |||| ||||| | ||| || || | Sbjct 139463 AATTCGTTAGAAAAAGTCAAACCTGGCATTAAACCTCTCTTCTTGATCCAGAAGATTGAA 139522 Query 17063 GCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCG 17122 || || || ||||| || || ||||| ||||||| || || || | ||||| ||| || Sbjct 139523 GCAAAAGATCCAGAGAAAAAGATACCTTCGACGGCAGCGAAAGCTACTAATCTTTCAGCA 139582 Query 17123 TACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAA 17182 | || || | ||| | |||||| | |||| || | ||||| || | | Sbjct 139583 AAGGTTGCTTTGGTGTCATTGATCCATCTTAAAGCCCATTCTCCCTTTTGTTTGACGACT 139642 Query 17183 TCCATCGTTTCTATGGCCTTAAATA--ATTTCTCTTTTTCCTGTAGGTCGATTATATACG 17240 ||||| |||| ||| | ||| | | | || ||| | ||| || || | Sbjct 139643 GGAATCGTCTCTAAGGCATCAAAGAGGAAAGTACGTTGATCTGGATCACGA--ATGTAGG 139700 Query 17241 TATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281 | ||||||||||| ||| |||||||||| ||||| ||| Sbjct 139701 TGTCGATGAGTAGAGAGTAGGTTTCGGAGTGGATGTTTTCC 139741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545192432840