Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 2e-12 >seq4 Length=1327562 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| || ||||| || | || |||||||| || ||||| || | | Sbjct 1257958 CCTCCACGAAGACGTAAGACCAAGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCTGAC 1258017 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | |||| |||| ||||| || ||||| || | || || || |||| || Sbjct 1258018 AAGGTTCTACCGTCTTCTAATTGCTTTCCTGCGAAAATCAATCTTTGTTGATCGGGTGGG 1258077 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| |||| | ||||| ||| | | | || || | ||||| | Sbjct 1258078 ATTCCTTCCTTGTCC-TGAATTTTGGCTTTGA-CGTTGTCGATGGTATCTCCAGATTCGA 1258135 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||| |||||||| || || || | ||||| |||||||||||||| Sbjct 1258136 CTTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTGACAAAGATTTGCAT 1258184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817149693640