Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq12 140 6e-28 >seq12 Length=1121745 Score = 140 bits (154), Expect = 6e-28 Identities = 231/331 (70%), Gaps = 2/331 (1%) Strand=Plus/Minus Query 35234 ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGC 35293 |||||||| | | | ||| ||||||||| |||||||| | |||||| ||| || Sbjct 391826 ACTACCAAAAGAGTCTTCACAAGAGGAGTTTTGGAAGAATTACTTTGGTTCGTCAAAGGT 391767 Query 35294 AATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 | || || ||||| ||| | | | ||| || || || ||| | | ||||| ||| Sbjct 391766 GAAACTGATTCCAAACTTTTGACTGATAGGAAAATTCATATTTGGGATGGAAATGGTTCG 391707 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413 |||||| ||||| |||||| ||| ||||| ||| || ||||| || || || Sbjct 391706 AAGGAATTCTTGGAATCTAGAGGTTTAGGTCATAGAAGAGAAGGGGATTTAGGTCCAGTT 391647 Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473 || || ||||||||| | ||||| |||||| ||||||| ||| | | ||||||| | Sbjct 391646 TATGGTTTCCAATGGAGACATTTCGGTGCTAAATATGAGGATTGTGATACGGATTATAGT 391587 Query 35474 GGAAAGGGTATTGATCAATTGGC-CAATATACTAAAGACCCTGAGAGAAAATCCAGATGA 35532 || || || | ||||||||||| ||| | | | || | | ||||| || ||| Sbjct 391586 GGCAAAGGAGTGGATCAATTGGCGGAATGT-GTTAGGAAAATAAAGGAAAACCCTACTGA 391528 Query 35533 TAGAAGGATGATTATGACGGCATGGAATCCT 35563 |||||| || ||||||| || ||||||||| Sbjct 391527 TAGAAGAATCATTATGAGTGCTTGGAATCCT 391497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583201220165