Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 5e-12 >seq4 Length=1327562 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | | |||||||| | ||| |||||||| | ||||||||| | Sbjct 1257730 CCACCACGTAGACGAAGAACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAATCGCTC 1257789 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || | |||| ||||||||||| || ||||| || | || |||||||| | || Sbjct 1257790 AAAGTTCTACCGTCTTCCAATTGTTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGA 1257849 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | || || || || ||| | || || | ||| || || | || ||||| Sbjct 1257850 ATTCCCTCCTTGTCTTGAATCTTTGCCTTAACGTTATCAATAGTATCACTAGATTCGACT 1257909 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| |||||||| | ||| || || ||||||||||| Sbjct 1257910 TCCAAAGTAATAGTCTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 1257956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369307179654