Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 104 4e-18 >seq1 Length=2409711 Score = 104 bits (114), Expect = 4e-18 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 |||| ||||||||| ||||||||||| |||| || || | |||| ||| | ||| ||| Sbjct 899627 GTGGTGTCAAGCGTATCTCTGGATTGATCTACGACGAAACCCGTGGAGTTCTCAAGCTCT 899568 Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 |||| || |||| ||| | ||| | || ||| || || ||| | || | ||||||| Sbjct 899567 TCCTAGAGTCCGTCATCAAGGATTCAGTCACCTACACTGAACACTCCAAGAGAAAGACTG 899508 Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||| || | || ||||||| || ||||| |||||||| Sbjct 899507 TCACTTCTCTTGACGTCGTCTACGCCTTGAAGCGTCAAGG 899468 Score = 95.1 bits (104), Expect = 2e-15 Identities = 117/160 (73%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 16512 GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCT 16571 |||| ||||||||| ||||||||||| |||| || || | |||| ||| | ||| ||| Sbjct 217228 GTGGTGTCAAGCGTATCTCTGGATTGATCTACGACGAAACCCGTGGAGTTCTCAAGCTCT 217287 Query 16572 TCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTG 16631 |||| || |||| ||| | || | || ||| || || ||| | || | ||||| | Sbjct 217288 TCCTAGAGTCCGTCATCAAGGACTCAGTCACCTACACTGAACACTCCAAGAGAAAGACCG 217347 Query 16632 TCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||| || | || ||||||| || ||||| |||||||| Sbjct 217348 TCACTTCTCTTGACGTCGTCTACGCCTTGAAGCGTCAAGG 217387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075142398659