Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq23 141 1e-28 >seq23 Length=563827 Score = 141 bits (156), Expect = 1e-28 Identities = 260/381 (68%), Gaps = 0/381 (0%) Strand=Plus/Plus Query 21307 TCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTT 21366 |||||| || || ||||| ||||||||||||||||||| | ||||| || || | Sbjct 139255 TCTATCAGCAACGAATTCAATATATTGACACATTAATTTAGCGTTCATTCCAATGAGAGC 139314 Query 21367 TACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATT 21426 ||| | ||| | | |||| |||| | ||| || || |||||| ||| ||| Sbjct 139315 GCAAGGTAAAGCGTCTCTCAAGAAAGCCTGTTCAATTCCAACAGCTTCAGTAATGATAGC 139374 Query 21427 TATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATC 21486 | | | || || | || | | ||| || || | ||||| || ||||| Sbjct 139375 CAAAACCGTATCTGGATGAGCTCTCTTCTTTAAATGAGAGAATAATAAACAAGCGAAATC 139434 Query 21487 ACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAA 21546 ||| ||||||||||| || || ||||| |||||||| || ||||| |||||||| Sbjct 139435 GGTATGTAAACCTTCATCTCTTGAAATCAATTCGTTAGAAAAAGTCAAACCTGGCATTAA 139494 Query 21547 TCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAAC 21606 |||||||| || | ||| || ||||| ||||| | ||| || || || || || || || Sbjct 139495 ACCTCTCTTCTTGATCCAGAAGATTGAAGCAAAAGATCCAGAGAAAAAGATACCTTCGAC 139554 Query 21607 GGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTC 21666 |||||| || || ||||||| |||| | | || | || | || |||||| || Sbjct 139555 GGCAGCGAAAGCTACTAATCTTTCAGCAAAGGTTGCTTTGGTGTCATTGATCCATCTTAA 139614 Query 21667 TGCCCATTTTGCCTTTTCTTT 21687 ||||||| | |||||| ||| Sbjct 139615 AGCCCATTCTCCCTTTTGTTT 139635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900381128120