Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq4 140 3e-28 seq15 104 2e-17 >seq4 Length=1327562 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || |||||||| | | ||| ||||| | || ||||| ||||||||||||||||||||| Sbjct 1257730 CCACCACGTAGACGAAGAACCAAATGAAGGGTGGATTCCTTTTGAATGTTGTAATCGCTC 1257789 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| | | ||||| | |||||| ||||| |||| ||||| ||||| || || ||| Sbjct 1257790 AAAGTTCTACCGTCTTCCAATTGTTTTCCAGCAAAGATAAGACGTTGTTGATCAGGTGGA 1257849 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| ||||||| || | | |||| || || | |||||||| Sbjct 1257850 ATTCCCTCCTTGTCTTGAATCTTTGCCTTAACGTTATCAATAGTATCACTAGATTCGACT 1257909 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || || ||||||| ||| || || ||||| ||||| Sbjct 1257910 TCCAAAGTAATAGTCTTTCCGGTCAAAGTCTTGACGAAAATTTGCAT 1257956 >seq15 Length=848729 Score = 104 bits (114), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || || ||||||||||||| ||| | | ||||| | ||||||||| Sbjct 552181 GTGGATTCCTTCTGGATATTGTAATCGCTCAGAGTTCTACCGTCTTCCAACTGTTTACCA 552122 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | | |||||||| ||||| || ||||| ||||| ||||| || Sbjct 552121 GCAAAGATCAATCTTTGTTGGTCGGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG 552062 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||||||||| || | ||| | ||| || ||||||| || Sbjct 552061 ACATTGTCAATGGTGTCACCGGATTCGACCTCTAGGGTGATCGTCTTACCGGTCAAGGTC 552002 Query 114366 TTTACAAAAATCTGC 114380 || || ||||| ||| Sbjct 552001 TTGACGAAAATTTGC 551987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134077415556