Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq28 143 5e-29 >seq28 Length=226377 Score = 143 bits (158), Expect = 5e-29 Identities = 624/981 (64%), Gaps = 27/981 (3%) Strand=Plus/Minus Query 244466 CCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGC 244525 ||||| |||||||| | || || || || || || ||||| ||||| || | || || Sbjct 217941 CCCATGATCATGAAAGCATCAGCTAGACCTTGAACACCGATTCCGATTGGACGATGACGG 217882 Query 244526 TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585 |||||| || ||||| || ||||| ||||| |||||| | |||||||||| Sbjct 217881 AAGTTGGAACGACGAGCTTCCTCGACAGGGTAGTAGTTGATGTCGATGATCTTGTTGAGG 217822 Query 244586 TTGCGGG---TGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGA 244642 || | ||| | || ||| || | || | | |||||||| | || | Sbjct 217821 TTTCCACAAATGACCTTGGAGACCTTGTGG---AGACGTTCGAAGTCGTAGGTCTTGGTA 217765 Query 244643 TCCTCGGCGATGGTGATCCTCACAAACTCGTTG--AGGGCGACGCTGGCCAGGTTGCAGA 244700 | || ||||| | |||| || |||| | |||| |||||||| Sbjct 217764 GCAGCGTCGATGAAG--------------GTTGGAAGAGCGATGGAAGCCAAGTTGCAGA 217719 Query 244701 CGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGA 244760 |||| || || |||| |||| | || || || || || ||||| |||||||| Sbjct 217718 CGGCTACTTCATCCGGAGCACTGTATTCGATGATTTCAGTACAAAGGTTTGAGCACTTGA 217659 Query 244761 TGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTT-GCAGGCGTCCTTGTAGAGCATGAAG 244819 |||| || |||| || || || ||| ||| |||| |||||||||| |||||| | Sbjct 217658 TGGTTCCTAGGTTCTTCTGGTTACTCTTTCTGTTTGCAG-CGTCCTTGTAAAGCATGTAA 217600 Query 244820 GGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACC 244879 || || || ||| || || | | || | | ||| || | ||| ||||| Sbjct 217599 GGATTTCCAGTTTCGGTTTGAGCTTCCAAGATGGCATACCAAAGCTTTTGAGCTTTGACG 217540 Query 244880 GTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCC 244939 || || || | || || | ||||| |||||| || || ||||| || || Sbjct 217539 GTTCTCTTGGCTCTACCTTCGGATTCGTACTTGGTGTAAAGAGCTTCGAATTCCTCTCCG 217480 Query 244940 CAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCC 244999 |||| || | || || ||||| | || || | ||| ||| || || | | Sbjct 217479 TAGACGTCAGCGAGACCTGGGCATTCTCCAGGACAAAGTAGAGACCAATCCTCGTTCTTC 217420 Query 245000 TTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTC 245059 | || |||| |||||||||||| || ||||| || || | ||| || || |||| | Sbjct 217419 TCTACTCTCTTCATGAAGAGGTCTGGAATCCAAAGAGCGTAGAACAGTTCTCTGGCACGA 217360 Query 245060 TGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAG 245119 || ||| || |||||| | || ||||| || || |||||||| ||||| Sbjct 217359 ACTTCCTCCTTTCCGTGGTTCTTACGTAGATCCAAGAATTCGAAGACGTCTGAATGCCAT 217300 Query 245120 GGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTC 245179 ||||||| ||||| || | ||| || || |||||||| ||||| || || || || Sbjct 217299 GGCTCCAAGTAGATGGCAAAGGCACCTGGACGCTTGTTTCCTCCTTGATCGACGTATCTA 217240 Query 245180 TCGAGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238 | || | |||| ||| || || | || || || ||||| ||| || ||||| || Sbjct 217239 GC-AGTGTTGTTGTAGACACGTAGCATGGGAACGATACCGTTGGAGAATCCATTGGTTCC 217181 Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTG 245298 ||||| | || | || | | |||| || | | || | ||| || || Sbjct 217180 AGCAATGTAAGATCCAGTTCCACGAATGTTGTGGACGTTGAGACCGATTCCACCTGCAGT 217121 Query 245299 CTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTT 245358 ||||||||| | ||| || |||||| ||||| || || || ||| ||| ||| Sbjct 217120 CTTGGAGATCATGGCACACGTCTTGAGAGTGTCGTAGATTCCTTCGATGGAGTCGTCCTT 217061 Query 245359 CATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGT 245418 |||| ||| || || ||||| |||| || | | || | | | |||||| ||||| Sbjct 217060 CATGGTGACCAAGAAACAGGAAGACATTTGAGAATGAGGAGTTCCAGCGTTGAAGAGAGT 217001 Query 245419 GGGGCTGGCGTGGGT-AAAGT 245438 || |||||||| ||||| Sbjct 217000 TGGAGAAGCGTGGGTGAAAGT 216980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338456332880