Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq28 84.2 5e-11 >seq28 Length=226377 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 318854 CCATTCGACTCATCGGAAGCCAGGGATCTCAACCGCGAAATCTTCGAACATATCTACTAC 318913 || |||||||| | ||||| | | |||||| | ||||||||||| ||||| || Sbjct 217946 CCTTTCGACTCTCCAGAAGCTCGTAAGCTCAACGTCCAAATCTTCGAAACCATCTATCAC 218005 Query 318914 GCCGCTGTAGAAGCATCGATAGAACTCGCTGAGATCCACGGTCCTTATCCAACATTCGAA 318973 |||||| | ||| ||||| ||| | ||||| ||| | || ||||| | || | ||| Sbjct 218006 GCCGCTTTGGAACGTTCGATCGAATTAGCTGAAATCGAAGGACCTTACTCTACTTACGAG 218065 Query 318974 GGGTCTCCCGCGAGCAAAGGCATCCTGCAGTACCACTTGTGGGATGTCACTCCT 319027 || ||| || || |||| || || ||| || |||||| |||||||||| Sbjct 218066 GGAAGTCCAGCAAGTCAAGGAGAACTTCAATACGACATGTGGGGTGTCACTCCT 218119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879109769050