Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq28 163 3e-35 >seq28 Length=226377 Score = 163 bits (180), Expect = 3e-35 Identities = 502/769 (65%), Gaps = 13/769 (2%) Strand=Plus/Minus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 ||||| ||||| || |||| || || || | |||||| | || |||| || || Sbjct 217746 GGAAGAGCGATGGAAGCCAAGTTGCAGACGGCTACTTCATCCGGAGCACTGTATTCGATG 217687 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 ||||| ||||| | ||||| | ||| ||||| || | |||||| || || |||| || Sbjct 217686 ATTTCAGTACAAAGGTTTGAGCACTTGATGGTTCCTAGGTTCTTCTGGTTACTCTTTCTG 217627 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || || ||||||||||||||||| || | || || || ||||| | | | || Sbjct 217626 TTTGCAGCGTCCTTGTAAAGCATGTAAGGATTTCCAGTTTCGGTTTGAGCTTCCAAGATG 217567 Query 114644 GCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTT 114703 || | ||| | | ||| || || ||||||| || || |||||||| Sbjct 217566 GCATACCAAAGCTTTTGAGCTTTGACGGTTCTCTTGGCTCTACCTTCGGATTCGTACTTG 217507 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 114762 ||||| || ||||| || || || || | | || | ||| ||||| || || | | || Sbjct 217506 GTGTAAAGAGCTTCGAATTCCTCTCCGTAGACGTCAGCGAGACCTGG-GCATTCTCCAGG 217448 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 || | |||||||| | | || ||| || | |||||||||||||||||| ||||| Sbjct 217447 ACAAAGTAGAGACCAATCCTCGTTCTTCTCTACTCTCTTCATGAAGAGGTCTGGAATCCA 217388 Query 114823 GAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACT 114881 ||||| |||| || || | | || ||| |||| || | || || || ||| | | Sbjct 217387 AAGAGCGTAGAACAGTTCTCTGGCA-CGAACTTCCTCCTTTCCGTGGTTCTTACGTAGAT 217329 Query 114882 CCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTAC 114941 |||| || || | || || | ||||| || |||| ||| | || | | | ||| Sbjct 217328 CCAAGAATTCGAAGACGTCTGAATGCCATGGCTCCAAGTAGATGGC-AAAGGCACCT--G 217272 Query 114942 GACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTG 114995 |||| || | || | || || || || ||| || | || || ||||| | Sbjct 217271 GACGCTTGTTTCCTCCTTGATCGACGTATCTAGCAGTGTTGTTGTAGACACGTAGCATGG 217212 Query 114996 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 115055 ||| |||||| | || ||||| || || ||| ||| | | | | | | Sbjct 217211 GAACGATACCGTTGGAGAATCCATTGGTTCCAGCAATGTAAGATCCAGTTCCACGAATGT 217152 Query 115056 CATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 |||| || | ||| || || ||||| ||| ||||| || ||| | ||||| Sbjct 217151 TGTGGACGTTGAGACCGATTCCACCTGCAGTCTTGGAGATCATGGCACACGTCTTGAGAG 217092 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175 || ||||||| || ||||| ||||| |||| | | || | ||| ||| ||||||| Sbjct 217091 TGTCGTAGATTCCTTCGATGGAGTCGTCCTTCATGGTGACCAAGAAACAGGAAGACATTT 217032 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 115224 | | || || |||||||||||||| ||||| | |||||| |||| Sbjct 217031 GAGAATGAGGAGTTCCAGCGTTGAAGAGAGTTGGAGAAGCGTGGGTGAA 216983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353129584040