Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq28 210 2e-49 >seq28 Length=226377 Score = 210 bits (232), Expect = 2e-49 Identities = 590/906 (65%), Gaps = 0/906 (0%) Strand=Plus/Plus Query 93733 TTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCCGAGCGACCG 93792 ||||| ||||| |||| || ||||| || || |||| | ||| |||| || || Sbjct 216833 TTCAAGACTCTTGAGAGATCTTACCTTCTACGAATCAATGGAAAGGTCGCCGAACGTCCT 216892 Query 93793 CACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCGAATGTTTTG 93852 || || |||| ||||| |||||||| || || || || |||| | || | | Sbjct 216893 CAACACATGCTCATGCGTGTCGCCATTGGAATCCATGGAACCGACGTCGAAAAGGCCATC 216952 Query 93853 CGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACCCTGTTCAAC 93912 | ||| | |||| || |||| | ||| || | || || || |||||| Sbjct 216953 GAGACTTATAACCTCATGTCCGAGAAGACTTTCACCCACGCTTCTCCAACTCTCTTCAAC 217012 Query 93913 GCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCC 93972 || || || || | || |||||||| |||||| || | || | |||| ||||||| Sbjct 217013 GCTGGAACTCCTCATTCTCAAATGTCTTCCTGTTTCTTGGTCACCATGAAGGACGACTCC 217072 Query 93973 ATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGA 94032 ||| ||||| | ||||| |||||| ||||| | ||||| || || || ||| Sbjct 217073 ATCGAAGGAATCTACGACACTCTCAAGACGTGTGCCATGATCTCCAAGACTGCAGGTGGA 217132 Query 94033 ATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGC 94092 ||||| ||| |||||| || | |||| | || || ||||| || |||||||| Sbjct 217133 ATCGGTCTCAACGTCCACAACATTCGTGGAACTGGATCTTACATTGCTGGAACCAATGGA 217192 Query 94093 ACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGAC 94152 ||||||||| |||| || ||||| || |||| ||||||| | || | ||||| || Sbjct 217193 TTCTCCAACGGTATCGTTCCCATGCTACGTGTCTACAACAACACTGCTAGATACGTCGAT 217252 Query 94153 CAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGAC 94212 || || || | | | ||| | || || |||| | ||||| ||||| | ||| Sbjct 217253 CAAGGAGGAAACAAGCGTCCAGGTGCCTTTGCCATCTACTTGGAGCCATGGCATTCAGAC 217312 Query 94213 GTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGAC 94272 || | ||| | || || || ||||||||||| || || | | |||||||| Sbjct 217313 GTCTTCGAATTCTTGGATCTACGTAAGAACCACGGAAAGGAGGAAGTTCGTGCCAGAGAA 217372 Query 94273 CTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCC 94332 || ||||||||||| ||| | |||||||| || ||||| | || ||||| ||| | Sbjct 217373 CTGTTCTACGCTCTTTGGATTCCAGACCTCTTCATGAAGAGAGTAGAGAAGAACGAGGAT 217432 Query 94333 TGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTT 94392 ||| ||| ||||||| ||||| || || || | ||||| | ||| | || Sbjct 217433 TGGTCTCTACTTTGTCCTGGAGAATGCCCAGGTCTCGCTGACGTCTACGGAGAGGAATTC 217492 Query 94393 GAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGG 94452 |||| | || | |||||||| | || | |||| || | | ||| Sbjct 217493 GAAGCTCTTTACACCAAGTACGAATCCGAAGGTAGAGCCAAGAGAACCGTCAAAGCTCAA 217552 Query 94453 AAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTC 94512 ||||| ||| || ||| |||| | || || || || | || ||||| | | | Sbjct 217553 AAGCTTTGGTATGCCATCTTGGAAGCTCAAACCGAAACTGGAAATCCTTACATGCTTTAC 217612 Query 94513 AAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAAT 94572 |||||| ||| ||| ||| |||||| || |||| || |||||| |||| || Sbjct 217613 AAGGACGCTGCAAACAGAAAGAGTAACCAGAAGAACCTAGGAACCATCAAGTGCTCAAAC 217672 Query 94573 CTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGC 94632 || || || || || |||| || | | ||||||| || | || || || ||| ||| Sbjct 217673 CTTTGTACTGAAATCATCGAATACAGTGCTCCGGATGAAGTAGCCGTCTGCAACTTGGCT 217732 Query 94633 TCCATC 94638 |||||| Sbjct 217733 TCCATC 217738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722810405480