Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 125 8e-24 >seq2 Length=1692430 Score = 125 bits (138), Expect = 8e-24 Identities = 197/278 (71%), Gaps = 8/278 (3%) Strand=Plus/Minus Query 153716 ATTGATGCAACCTGTAGGTGAGTGGGGATTTGATATTGCTGTAGGTAGTATGCAA--AGG 153773 |||||| |||||| ||| || ||||| ||||| || | || | || || || Sbjct 707825 ATTGATTCAACCTCCAGGAGAATGGGGTGCAGATATCGCACTTGGAA--ATTCAGCTAGA 707768 Query 153774 TTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 153833 |||||| ||||| |||||||| |||||||||||||| |||||| | | || || Sbjct 707767 TTTGGTGTTCCTCCTGGATATGGTGGTCCTCATGCTGCTTTCTTTTCGGTTTCTGATAAA 707708 Query 153834 TATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGTGAAGGTAATA 153891 | ||||||||||| || || ||| | ||||| | ||| || |||| | |||| | Sbjct 707707 TTGAAGAGAAAGATTCCAGGTAGATTGGTAGGTTTGAGTAAG--GATACTAGAGGTGAAC 707650 Query 153892 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCA 153951 || || ||||| || | || |||||||| || ||||| || ||||| ||||| || Sbjct 707649 CTGCTTATAGATTGGCTTTGCAAACTAGAGAACAACATATTAGAAGAGAGAAAGCTACTT 707590 Query 153952 GTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATG 153989 ||||| ||||| ||||| || ||||||| || ||| Sbjct 707589 CAAACATTTGCACTGCTCAAGCTTTGCTGGCAAACATG 707552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212343869920