Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=1692430 Score = 116 bits (128), Expect = 4e-21 Identities = 195/278 (70%), Gaps = 8/278 (3%) Strand=Plus/Minus Query 158391 ATTGATGCAACCTGTAGGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAA--AGG 158448 |||||| |||||| ||| || ||||| || || || | || | || || || Sbjct 707825 ATTGATTCAACCTCCAGGAGAATGGGGTGCAGATATCGCACTTGGAA--ATTCAGCTAGA 707768 Query 158449 TTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAG 158508 |||||| ||||| ||||| || |||||||||||||| |||||| | | || || Sbjct 707767 TTTGGTGTTCCTCCTGGATATGGTGGTCCTCATGCTGCTTTCTTTTCGGTTTCTGATAAA 707708 Query 158509 TATAAGAGAAAGATACCTGGCAGAATTGTAGG--TCAGTCAGTAGATAGCGAAGGTAATA 158566 | ||||||||||| || || ||| | ||||| | ||| || |||| |||| | Sbjct 707707 TTGAAGAGAAAGATTCCAGGTAGATTGGTAGGTTTGAGTAAG--GATACTAGAGGTGAAC 707650 Query 158567 AAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCA 158626 || || ||||| || | || |||||||| || ||||| |||||||| ||||| || Sbjct 707649 CTGCTTATAGATTGGCTTTGCAAACTAGAGAACAACATATTAGAAGAGAGAAAGCTACTT 707590 Query 158627 GTAACATCTGCACAGCACAAGCACTGCTGGCTAATATG 158664 ||||| ||||| || ||||| ||||||| || ||| Sbjct 707589 CAAACATTTGCACTGCTCAAGCTTTGCTGGCAAACATG 707552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588050736909680