Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 3e-11 >seq12 Length=1121745 Score = 84.2 bits (92), Expect = 3e-11 Identities = 159/230 (69%), Gaps = 8/230 (3%) Strand=Plus/Minus Query 104865 AAGAATTATTATGGGTGATGAAAGGTTTAACAAATTCTAACTTGTTAAATGAAATTGGTG 104924 |||||||| | ||| | | |||||| ||| |||| || | || | ||| | Sbjct 391792 AAGAATTACTTTGGTTCGTCAAAGGTGAAACTGATTCCAAACTTTTGACTGATAGGAAAA 391733 Query 104925 TTAAAGTATGGAATGATAATGGTTC-ACGTAAGTTTTTAGATTCTTGTGGATT---TCAC 104980 || | | ||| ||| |||||||| | | || || || || ||| | || || ||| Sbjct 391732 TTCATATTTGGGATGGAAATGGTTCGAAGGAA-TTCTTGGAATCTAGAGGTTTAGGTCA- 391675 Query 104981 TTTCGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCT 105040 | ||| |||||| |||||||| ||| ||||||| || |||||||||||| || ||| Sbjct 391674 --TAGAAGAGAAGGGGATTTAGGTCCAGTTTATGGTTTCCAATGGAGACATTTCGGTGCT 391617 Query 105041 CAATATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATT 105090 ||||| || |||||||| || |||| ||| |||| | || ||||| Sbjct 391616 AAATATGAGGATTGTGATACGGATTATAGTGGCAAAGGAGTGGATCAATT 391567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658402681507480