Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq28 123 5e-23 >seq28 Length=226377 Score = 123 bits (136), Expect = 5e-23 Identities = 422/650 (65%), Gaps = 12/650 (2%) Strand=Plus/Minus Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATG 213539 || || |||||| |||| |||||| ||||| || || | | | |||| || ||| Sbjct 217746 GGAAGAGCGATGGAAGCCAAGTTGCAGACGGCTACTTCATCCGGAGCACTGTATTCGATG 217687 Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599 || || || || ||||| ||| |||||| || ||||||| ||||| |||| | Sbjct 217686 ATTTCAGTACAAAGGTTTGAGCACTTGATGGTTCCTAGGTTCTTCTGGTTACTCTTTCTG 217627 Query 213600 TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATC 213659 || |||| |||||||| |||||||| || || || || || | ||| || Sbjct 217626 TTTGCAGCGTCCTTGTAAAGCATGTAAGGATTTCCAGTTTCGGTTTGAGCTTCCAAGAT- 217568 Query 213660 TGGCT--CCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGT 213717 ||| ||| || | || ||||| | | || | || | || | |||| Sbjct 217567 -GGCATACCAAAGCTTTTGAGCTTTGACGGTTCTCTTGGCT-CTACCTTCGGAT--TCGT 217512 Query 213718 ACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATG 213777 ||| ||| || | | |||||| | || |||| | || || || || | Sbjct 217511 ACTTGGTGTAAAGAGCTTCGAATTCCTCTCCGTAGACGTCAGCGAGACCTGGGCATTCTC 217452 Query 213778 CGGGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGG 213836 | ||||| | || ||| ||| ||| | ||||| ||||||| |||||| ||||| || Sbjct 217451 CAGGACAAAGTAGAGACCAATCCTCGTTCTTCTCT-ACTCTCTTCATGAAGAGGTCTGGA 217393 Query 213837 ACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGC 213896 | ||| || ||| |||||| || |||| | || ||| ||| ||| || || Sbjct 217392 ATCCAAAGAGCGTAGAACAGTTCTCTGGCACGAACTTCCTCCTTTCCGTGGTTCTTACGT 217333 Query 213897 AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 ||||| | || || |||| ||| | ||||| ||||||| ||||||||||||||| || Sbjct 217332 AGATCCAAGAATTCGAAGACGTCTGAATGCCATGGCTCCAAGTAGATGGCAAAGGCACCT 217273 Query 213957 GGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACG 214013 || | |||| || || || || || || || ||||| ||| || || | | Sbjct 217272 GGACGCTTGTTTCCTCCTTGATCGACGTATCTAGCAGTGTTGTTGTAGACACGTAGCATG 217213 Query 214014 GGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG 214073 || || | |||||||| ||| |||||||| || || || || || | | | | | Sbjct 217212 GGAACGATACCGTTGGAGAATCCATTGGTTCCAGCAATGTAAGATCCAGTTCCACGAATG 217153 Query 214074 TTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 ||| | | ||| || || ||||| || ||||||||||||||| || Sbjct 217152 TTGTGGACGTTGAGACCGATTCCACCTGCAGTCTTGGAGATCATGGCACA 217103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532066417920