Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq28 176 8e-39 >seq28 Length=226377 Score = 176 bits (194), Expect = 8e-39 Identities = 470/714 (66%), Gaps = 6/714 (1%) Strand=Plus/Minus Query 221756 ATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTG 221815 ||||| || ||||| ||||| |||||||||||| || |||| || || ||| ||| Sbjct 217689 ATGATTTCAGTACAAAGGTTTGAGCACTTGATGGTTCCTAGGTTCTTCTGGTTACTCTTT 217630 Query 221816 CGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGA 221875 | || |||||||||||||| ||||| | ||| ||||| || ||||| ||| Sbjct 217629 CTGTTTGCAGCGTCCTTGTAAAGCATGTAAGGATTTCCAGTTTCGGTTTGAGCTTCCAAG 217570 Query 221876 ATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCA 221935 || | ||| || | | || | || || |||||| || ||| |||| ||| Sbjct 217569 ATGGCATACCAAAGCTTTTGAGCTTTGACGGTTCTCTTGGCTCTACCTTCGGA---TTCG 217513 Query 221936 TACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTG 221995 ||| ||| || || || || | || ||||| | || | || ||||| || Sbjct 217512 TACTTGGTGTAAAGAGCTTCGAATTCCTCTCCGTAGACGTCAGCGAGACCTGGGCATTCT 217453 Query 221996 GCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGG 222055 | ||||| | ||| ||| | || ||| | | || |||| |||||||||||| || Sbjct 217452 CCAGGACAAAGTAGAGACCAATCCTCGTTCTTCTCTACTCTCTTCATGAAGAGGTCTGGA 217393 Query 222056 ATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTC 222115 ||||| || || | || || ||||||| || |||||| |||| ||| || | Sbjct 217392 ATCCAAAGAGCGTAGAACAGTTCTCTGGCACGAACTTCCTCCTTTCCGTGGTTCTTACGT 217333 Query 222116 AGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCG 222175 |||||||| || || || | ||| | ||||| ||||||| |||| ||| | || || Sbjct 217332 AGATCCAAGAATTCGAAGACGTCTGAATGCCATGGCTCCAAGTAGATGGCAAAGGCACCT 217273 Query 222176 GGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGT 222234 || |||||||| || || ||||| || || ||| | |||| ||| || || | Sbjct 217272 GGACGCTTGTTTCCTCCTTGATCGACGTATCT-AGCAGTGTTGTTGTAGACACGTAGCAT 217214 Query 222235 CGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAG 222294 || || | |||||||| || ||||| || |||||| | || | | | Sbjct 217213 GGGAACGATACCGTTGGAGAATCCATTGGTTCCAGCAATGTAAGATCCAGTTCCACGAAT 217154 Query 222295 GTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAG 222354 ||| | | | ||||| ||||| || || ||||||||||| || ||||||| Sbjct 217153 GTTGTGGACGTTGAGACCGATTCCACCTGCAGTCTTGGAGATCATGGCACACGTCTTGAG 217094 Query 222355 AGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACAT 222414 |||||| ||| || || || ||||| ||||| | | | | || ||||| || ||||| Sbjct 217093 AGTGTCGTAGATTCCTTCGATGGAGTCGTCCTTCATGGTGACCAAGAAACAGGAAGACAT 217034 Query 222415 CTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGT-AAAGT 222467 ||||| | | | | ||||| || || || ||| ||||| || ||||| Sbjct 217033 TTGAGAATGAGGAGTTCCAGCGTTGAAGAGAGTTGGAGAAGCGTGGGTGAAAGT 216980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844068534720