Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq28 132 2e-26 >seq28 Length=226377 Score = 132 bits (146), Expect = 2e-26 Identities = 293/436 (67%), Gaps = 4/436 (1%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||||| | || | |||||| | || | ||| ||| ||| ||| || | ||||||||| Sbjct 217449 GGACAAAGTAGAGACCAATCCTCGTTCTTCTCTACTCTCTTCATGAAGAGGTCTGGAATC 217390 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || || || | ||||| || | | ||| || |||||||| ||||| |||| Sbjct 217389 CAAAGAGCGTAGAACAGTTCTCTGGCACGAACTTCCTCCTTTCCGTGGTTCTTACGTAGA 217330 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || ||||| || || | ||||| |||||||| || || ||||| ||||| |||| Sbjct 217329 TCCAAGAATTCGAAGACGTCTGAATGCCATGGCTCCAAGTAGATGGCAAAGGCACCTGGA 217270 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | || ||| |||||||| |||||||| ||||| | ||| | || | ||| ||| Sbjct 217269 CGCTTGTTTCCTCCTTGATCGACGTATCTAGCAGTGTTGTTGTAGACACGTAGCATGGGA 217210 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 || | || | || ||||| || || | | ||| | ||||| || | ||| | | Sbjct 217209 ACGATACCGTTGGAGAATCCATTGGTTCCAGCAATGTAAGATCCAGTTCCACGAATGTTG 217150 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATC-TGAAACTG 26249 || | | | |||||||||||| || || || || ||||| || ||| | | Sbjct 217149 TGGACGTTGAGACCGATTCCACCTGCAGTCTTGGAGATCATGGCACACGTCTTGAGA--G 217092 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | ||| | ||||||| ||| || | ||||| | || ||||| ||||| | || Sbjct 217091 TGTCGTAGATTCCTTCGATGGAGTCGTCCTTCATGGTGACCAAGAAACAGGAAGACATTT 217032 Query 26310 GCGAATGAGTTGTTCC 26325 | ||||||| ||||| Sbjct 217031 GAGAATGAGGAGTTCC 217016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039805712725