Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 129 7e-25 >seq2 Length=1692430 Score = 129 bits (142), Expect = 7e-25 Identities = 197/277 (71%), Gaps = 8/277 (3%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 ||| ||||| |||| ||||| || ||||| ||||| || ||||| ||||||||||| Sbjct 707552 CATGTTTGCCAGCAAAGCTTGAGCAGTGCAAATGTTTGAAGTAGCTTTCTCTCTTCTAAT 707611 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCC--ACT 139415 ||| || ||||||||||| | || ||||| || ||||| | ||| | ||| ||| Sbjct 707612 ATGTTGTTCTCTAGTTTGCAAAGCCAATCTATAAGCAGGTTCACCTCTAGTATCCTTACT 707671 Query 139416 GACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAAT 139475 | |||||| | ||| || || ||||||||||| | || || | | |||||| Sbjct 707672 --CAAACCTACCAATCTACCTGGAATCTTTCTCTTCAATTTATCAGAAACCGAAAAGAAA 707729 Query 139476 GCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCT--TTGCATACTACCTACAG 139533 |||||||||||||| || ||||| ||||| |||||| || || || | || | | Sbjct 707730 GCAGCATGAGGACCACCATATCCAGGAGGAACACCAAATCTAGCTGAAT--TTCCAAGTG 707787 Query 139534 CAATATCAAATCCCCACTCACCTACAGGTTGCATTAA 139570 | ||||| ||||| || ||| |||||| || || Sbjct 707788 CGATATCTGCACCCCATTCTCCTGGAGGTTGAATCAA 707824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997944038760