Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Golubevia_20pallescens_20[genbank_20GCA_5F001599655.1_202016-03-01] 63 sequences; 27,756,302 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4 91.5 1e-13 >seq4 Length=1327562 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/215 (70%), Gaps = 10/215 (5%) Strand=Plus/Plus Query 34768 GACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827 ||||| ||||| || ||||| || ||||| ||||| || | | | | | || || Sbjct 1257975 GACCAAGTGAAGAGTCGATTCCTTTTGGATGTTGTAGTCTGACAAGGTTCTACCGTCTTC 1258034 Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTT 34887 | ||||||||| ||||| |||| || ||| || || | || | || |||||||| | Sbjct 1258035 TAATTGCTTTCCTGCGAAAATCAATCTTTGTTGATCGGGTGGGATTCCTTCCTTGTCCTG 1258094 Query 34888 TATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 ||||| ||||||| |||| |||| | || | ||||| || | || ||| Sbjct 1258095 AATTTTGGCTTTGACGTTGTCGATGGTATC--TCCA---GATTCGACTTCGAGAGTGATG 1258149 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||||| || | |||||| |||||||| ||||| Sbjct 1258150 GTCTTTCCTGTCAAGGTCTTGACAAAGATTTGCAT 1258184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692549928997